| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2027 |
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| Symbol | |
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| ID | 4923866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2341219 |
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| End bp | 2341938 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163600 |
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| Product | NAD(P) transhydrogenase subunit alpha |
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| Protein accession | YP_001094152 |
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| Protein GI | 127512955 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0686] Alanine dehydrogenase |
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| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000246944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000236508 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGAAG TTGCCGGTCG TATGTCTATC CAGGCTGGTG CCATGGCACT GGAAAAATCA
ATGGGTGGCC GCGGCATGCT ACTTGGCGGC GTACCTGGTG TTGAGCCCGC TAAAGTCGTT
ATCATCGGCG GCGGCATGGT TGGTACCAAC GCAGCACAGA TGGCCGTTGG CCTGGGCGCG
GACGTGGTTA TCCTAGATCG CAGCATCGAT GCGCTGCGTC GTCTGAACGC TCAGTTCGAT
AACCGTGTTA AGGCAATCTA CTCGACTGCC GACGCTATCG AAAAGCACGT ACTGGAAGCC
GACCTAGTGA TTGGTGGCGT ACTGGTTCCT GGTGCAGCAG CACCTAAACT AGTGACCAAA
GATCACATCA AGCGAATGAA GCCAGGCAGC GCTATCGTTG ACGTCGCTAT CGACCAAGGC
GGTTGTGTTG AGACTTCTCA TGCTACGACT CACCAAGACC CAACTTATAT CGTTGATGAA
GTAGTACATT ACTGTGTGGC TAACATGCCA GGTGCTGTGG CTCGTACCTC GACCTTCGCG
CTGAACAACG CGACCCTGCC TTACATCATC AAGTTGGCCG ACATGGGTTA CCGCGAAGCA
CTGCGTCAAG ACAAGCACCT GCTAAACGGC TTGAACGTAA TGCATGGTAA GGTAACCTGT
AAAGAAGTTG CTGAAGCCCT GAACTTCGAG TTTGTTGATC CAAGCGTACT ACTCGCCTAA
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| Protein sequence | MSEVAGRMSI QAGAMALEKS MGGRGMLLGG VPGVEPAKVV IIGGGMVGTN AAQMAVGLGA
DVVILDRSID ALRRLNAQFD NRVKAIYSTA DAIEKHVLEA DLVIGGVLVP GAAAPKLVTK
DHIKRMKPGS AIVDVAIDQG GCVETSHATT HQDPTYIVDE VVHYCVANMP GAVARTSTFA
LNNATLPYII KLADMGYREA LRQDKHLLNG LNVMHGKVTC KEVAEALNFE FVDPSVLLA
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