Gene Shew_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2024 
Symbol 
ID4923863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2336656 
End bp2339181 
Gene Length2526 bp 
Protein Length841 aa 
Translation table11 
GC content53% 
IMG OID640163597 
Productcell divisionFtsK/SpoIIIE 
Protein accessionYP_001094149 
Protein GI127512952 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000111229 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000274809 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
TTGTCTAAGG GAAATAGTGT CAAAACACTC AGCGGTCTGC AGCGTCTGCT TGAAGGCGGA 
CTCATCCTCT GCTGCATGGT CGCCACCTAT ATTCTGCTTG CACTGAGCAG CTTTCATTCG
TCTGATCCTG GATGGAGTCA GTCTAATTTC GAAGGTGAGA TTAAAAACGT TACCGGCGCC
GTGGGAGCAT GGCTTGCCGA TGTGCTTTTC TATTTCTTTG GTTACACCGC CTACCTTATT
CCTATCATAG TGGCGGTGAC CGGTTGGCTG TTGTTCAAGC GTATTCACCG ACTGTTGGAG
ATAGATTATT TTTCGGTAGG GCTAAGGCTG ATTGGTTTCT TGTTGATCAC CTTCAGCCTT
GCGTCCCTTG CCAGCATGAA TGCCAATGAC ATCTACGAGT TCTCGGCTGG CGGCGTCTCC
GGTGATGTGA TCGCCGATGC CATGTTGCCT TATTTTAATC AGCTGGGCAC CACCTTGCTG
CTGCTCTGTT TCGTCGGCGC CGGCTTTACT TTGCTGACCG GCATCAGCTG GCTAACCGTG
GTCGAGGTGG TTGGTTTTGC CACCATCTGG TGTTTGAAGC AGCTTAAACA TGTTCCCGAG
AAATTCTCGA GTGCGCCCGA AACCGATGAT ACCAAGGGGT TCATGTCGGT ATTTGACCGA
TTCAAGGAGT CTCGTCGTCA AAAGGCTTTG GCTAAGGCCG AAGAAGAGGT CTATGAAGAC
GATCAGGATG ATTACGATGA TGAATATGAT GAAGATGAGG CTCAAGAAAC TTCTTCTCGC
GGCCGGGTTA AGGAGTCAAG CTTTAGCCTG CCAACGGCAA AAACCGCTGC TGAGGTAGAA
GCGCAAGAGC CTTCTCTGAG CTTTAGTGCT CAGGATGATG AAGTCTCCAT AGATTTCGAT
GCCAAGCATT CAACTGGCGC CGTGCTGCCC AAGAAACTGC CCAAAAACCA GAAGGTCGAG
CAGGCAAAAA TTGTCGATGG CATAGTCGTC CTGCCGGGCG GAGAAGAGGC TCAGCCGAAG
AAGCCTGTTA CGCCGCTACC GGATATTTCA CTGCTCGATG TGCCAAATCG TAAGACAAAC
CCGATCAGTC AGGAAGAGCT GGATCAGGTG GCGCGTCTGG TCGAGGTCAA GCTTGCCGAC
TTTAACATTG TGGCCAAGGT GGTCGGCGTC TTCCCTGGCC CTGTGGTGAC CCGTTTCGAG
CTTGAGCTCG CGCCAGGCGT CAAAGCGTCT AAGATCACTA ACCTGTCGAA AGATCTCGCG
CGCTCGCTGC TAGCCGAGAG TGTTCGTGTG GTCGAGGTGA TCCCGGGTAA GGCCTATGTG
GGTCTGGAGA TCCCGAACAA GTTCCGCGAA ACCGTGTTTA TGCGTGACGT GCTCGGCAGC
GAAGCCTTTG AGCATAGCAA GTCTCATCTT AGCATGGTGC TGGGTCAGGA TATCTCGGGT
GAACCTGTGG TGGTGGATCT TGGTAAGATG CCACACCTTC TGGTGGCCGG TACTACTGGT
TCGGGTAAGT CTGTAGGGGT CAACGTGATG ATCACCAGCT TGCTCTATAA GTCAGGGCCG
GATGATGTAC GCTTCATCAT GATCGATCCT AAGATGCTGG AACTTTCTGT GTATGAAGGC
ATTCCACATC TCCTCTGCGA GGTAGTGACC GACATGAAGG AGGCGGCCAA CTCCCTACGC
TGGTGTGTGG GCGAGATGGA GCGTCGCTAT AAGCTGATGT CTGCCTTAGG GGTGCGTAAT
CTCAAGGGTT ACAACGCCAA GATCAAGGAA GCTAAGGAGC GCGGTGAGGA GATCACAGAT
CCGCTGTGGC GCTCACAAGA CAGCATGGAA GAGCATGCGC CTGAGCTAGA TAAACTGCCG
TCTATAGTGG TGATCGTCGA TGAATTTGCC GACATGATGA TGATAGTCGG TAAGAAGGTG
GAAGAGCTGA TCGCCCGTAT CGCCCAGAAG GCCAGGGCCG CCGGTATCCA CCTTATTCTG
GCGACCCAGC GTCCATCGGT TGATGTGATC ACGGGCCTGA TTAAAGCCAA CATCCCAACC
CGTATGGCGT TTCAGGTGTC GTCCCGTATC GATTCGCGCA CCATCTTAGA TCAGCAAGGT
GCTGAAACTC TGCTGGGTAT GGGTGACATG CTCTATCTAC CACCCGGGAC CAGTGTGCCT
ATCCGTGTTC ACGGCGCCTT TATCGATGAC CATGAAGTCC ATGCTGTGGT GGCCGACTGG
CATAGTCGCG GCAAGCCGCA ATATATCGAT GAGATCTTGC AGGGCTCGGC CGAAGGGGAG
CAGGTGCTGC TGCCGGGTGA AGCCGCGGAG AATGATGAAG AGATGGACTC TCTCTACGAT
GAGGCGGTGG CCTTTGTTAC CGAGACCCGT CGTGGTTCTA TCTCCAGCGT GCAGCGTAAG
TTTAAGATTG GCTATAACCG CGCCGCTCGC ATCATAGAAC AGATGGAGAT GCAGGGCGTC
GTCAGCTCTC AAGGCCATAA CGGTAACCGT GAGGTGCTGG CGCCTCCGCC GCCGAAAGAT
TATTAA
 
Protein sequence
MSKGNSVKTL SGLQRLLEGG LILCCMVATY ILLALSSFHS SDPGWSQSNF EGEIKNVTGA 
VGAWLADVLF YFFGYTAYLI PIIVAVTGWL LFKRIHRLLE IDYFSVGLRL IGFLLITFSL
ASLASMNAND IYEFSAGGVS GDVIADAMLP YFNQLGTTLL LLCFVGAGFT LLTGISWLTV
VEVVGFATIW CLKQLKHVPE KFSSAPETDD TKGFMSVFDR FKESRRQKAL AKAEEEVYED
DQDDYDDEYD EDEAQETSSR GRVKESSFSL PTAKTAAEVE AQEPSLSFSA QDDEVSIDFD
AKHSTGAVLP KKLPKNQKVE QAKIVDGIVV LPGGEEAQPK KPVTPLPDIS LLDVPNRKTN
PISQEELDQV ARLVEVKLAD FNIVAKVVGV FPGPVVTRFE LELAPGVKAS KITNLSKDLA
RSLLAESVRV VEVIPGKAYV GLEIPNKFRE TVFMRDVLGS EAFEHSKSHL SMVLGQDISG
EPVVVDLGKM PHLLVAGTTG SGKSVGVNVM ITSLLYKSGP DDVRFIMIDP KMLELSVYEG
IPHLLCEVVT DMKEAANSLR WCVGEMERRY KLMSALGVRN LKGYNAKIKE AKERGEEITD
PLWRSQDSME EHAPELDKLP SIVVIVDEFA DMMMIVGKKV EELIARIAQK ARAAGIHLIL
ATQRPSVDVI TGLIKANIPT RMAFQVSSRI DSRTILDQQG AETLLGMGDM LYLPPGTSVP
IRVHGAFIDD HEVHAVVADW HSRGKPQYID EILQGSAEGE QVLLPGEAAE NDEEMDSLYD
EAVAFVTETR RGSISSVQRK FKIGYNRAAR IIEQMEMQGV VSSQGHNGNR EVLAPPPPKD
Y