| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2020 |
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| Symbol | |
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| ID | 4923859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2332809 |
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| End bp | 2334095 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163593 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_001094145 |
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| Protein GI | 127512948 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000521115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00090554 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAGATC CCAAATTTTT ACGTACTGAA TTAGAAGCGA CCGCCGAGCG TCTCGCCACC
CGTGGTTTTA TCCTGGATGT GGATCGTCTC AGCAAGTTAG AGGAAAAGCG TAAGTCACTA
CAGGTGGCGA CAGAAGAGCT GCAAGCGTCC CGTAATGCGA TCTCCAAGTC TATCGGTCAG
GCTAAGGCAA AGGGCGAAGA TGTTGCACCT ATCATGGCCA AAGTCGGCGA TCTTGGCGCC
GAGCTTAGCA GTAAAGAAGC CGAGTTAAAG CAGCTGCTGG AAGAGCTGAA TGCTATCGCC
ATGAGCGTGC CTAACCTGCC GGACGAGTCG GCGCCTATTG GTGCGGACGA AAACGACAAC
GTCGAGATCC GCCGCTGGGG TGAGCCTAAG CAGTTTGATT TCGATGTGAA AGATCATGTG
GATCTGGGTG AGCAACACGC TGGTCTTGAT TTCAAGAGTG CCGTTAAGAT CACCGGTTCT
CGTTTCATCG TGATGAAGGG GCAGATCGCC CGCATGCACC GTGCGCTAAC TCAGTTCATG
CTGGATCTGC ACACCACAGA GCATGGTTAC ACTGAAACCT ATGTGCCGCT GCTGGTTAAC
GAAGACAGCC TGCTTGGTAC CGGTCAGCTG CCTAAGTTTG GTGAAGATCT GTTCCACACC
AAGCCTGCTA CCGAAGAAGG TCAGGGCCTA AGCCTGATCC CAACCGCCGA GGTGCCGCTG
ACTAACCTGG CTCGCGATAC CATTATCGAT GAAGATGAGC TGCCGATTAA GATGACGGCT
CATACGGCTT GTTTCCGCAG CGAAGCGGGC TCATACGGCC GTGATACTCG TGGTCTTATT
CGTCAGCACC AGTTCGACAA GGTAGAGTTG GTTCAGCTGG TGAAACCAGA AGACTCTATG
GCCGCGCTCG AGAGTCTGAC TCAACACGCT GAAACCGTGC TGCAACGCCT GGGTCTGCCA
TATCGCACTG TAGTACTTTG TACTGGCGAT ATGGGCTTTG GCGCGGCTAA GACCTTTGAT
ATTGAAGTCT GGCTGCCTGC ACAGAATACT TACCGCGAGA TCTCATCTTG CAGCAACATG
CAAGATTTTC AGGCTCGTCG CATGCAAGCT CGCTATAAAG CAAAGTCAGC CAAGAAGCCT
GCACTGCTGC ACACATTGAA TGGTTCAGGT TTAGCGGTCG GTCGTACTTT GGTCGCCGTG
TTGGAAAACT ATCAAAATGC CGATGGTTCA ATCACAGTTC CAGAGGCGCT GCGTCCATAT
ATGGGCGGGC TGACTCAAAT AGGCTAA
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| Protein sequence | MLDPKFLRTE LEATAERLAT RGFILDVDRL SKLEEKRKSL QVATEELQAS RNAISKSIGQ
AKAKGEDVAP IMAKVGDLGA ELSSKEAELK QLLEELNAIA MSVPNLPDES APIGADENDN
VEIRRWGEPK QFDFDVKDHV DLGEQHAGLD FKSAVKITGS RFIVMKGQIA RMHRALTQFM
LDLHTTEHGY TETYVPLLVN EDSLLGTGQL PKFGEDLFHT KPATEEGQGL SLIPTAEVPL
TNLARDTIID EDELPIKMTA HTACFRSEAG SYGRDTRGLI RQHQFDKVEL VQLVKPEDSM
AALESLTQHA ETVLQRLGLP YRTVVLCTGD MGFGAAKTFD IEVWLPAQNT YREISSCSNM
QDFQARRMQA RYKAKSAKKP ALLHTLNGSG LAVGRTLVAV LENYQNADGS ITVPEALRPY
MGGLTQIG
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