Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2015 |
Symbol | |
ID | 4924266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2331189 |
End bp | 2331578 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640163588 |
Product | DsrE family protein |
Protein accession | YP_001094140 |
Protein GI | 127512943 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1553] Uncharacterized conserved protein involved in intracellular sulfur reduction |
TIGRFAM ID | [TIGR03012] sulfur relay protein TusD/DsrE |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000123098 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00302042 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAAGC TCATCATTCA AGTCAATCAG GCTGGTTACG GCCAGGGTAG CAGCTATCAG GCGCTGCAAT TTACTAAGGC GGCTATCGAT GCCGGCCATG AAGTGGTCAA AGTCTTCTTC TATCAAGACG GTGTATTATC GACCAATCAT CTACAATCGC CCGCCTCCGA CGAGTTTGCC CTTTACCAGG CCTGGCGTGA GCTGGGACAG ACACATCAAG TGCCCTTGGT AAACTGCGTA TCGGCGGCGC TGCGCCGCGG CGTTTTATCT GCGGCCGAAT CGGCTGAAAA CCAGTTACAG CATTGGAACC TCGAGCCCCC CTTTCAGATG GGCGGCCTTG GCGAACTCGT GACCGGTATA GAGCAAGCCG ATCGCGTGAT CTGTTTTTAA
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Protein sequence | MSKLIIQVNQ AGYGQGSSYQ ALQFTKAAID AGHEVVKVFF YQDGVLSTNH LQSPASDEFA LYQAWRELGQ THQVPLVNCV SAALRRGVLS AAESAENQLQ HWNLEPPFQM GGLGELVTGI EQADRVICF
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