| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2014 |
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| Symbol | |
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| ID | 4924265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2330344 |
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| End bp | 2331003 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163587 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094139 |
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| Protein GI | 127512942 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000147608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00304334 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACGCAAG AAACACTATA TGCAAGCCAT GCTTCGACAC AAGAAGTGAA TAAGCTGCTT
AAAAATACCT ATCTGCTGCT CTCGATGACA CTGGGCTTCT CAGCGCTGTG TGCGGGGCTG
GCAATGGTGT TGCAAATCAG TCCTCTCATG TCTATCGGTC TGTCGATCGG TGGTTTCATT
TTGTTGTTTG TCACCCTGAG AAAGGCCGAG TCGGCCGCGG GGCTGTTTTG GGTGTTTGCC
TTTACGGGTA TGGAAGGTGC CTCGCTTGGC TACATGCTTA ATCATTATGC TGGCATGGCC
AACGGTCCTC AGCTCATCAT GCAGGCCTTA GGCTTGACTG CCGTAGTGTT CGTTACCCTG
AGCGGCTATG CCATCACCAC CAAGAAAGAC TTCTCTTTCA TGCGTGGCTT CCTGCTCGCC
GGTTTGGTCA TTGCCATCGT TGCCGGTATC GCCAACATCT TCATCGGTAG CGGCGCGGTG
TTCATGGCCC TCAACGCGGG TATCGCCCTG TTAATGACAG GCTTTATCCT GTTCGATACC
AGCCGCATCG TCAACGGCGG TGAAACCAAC TACATACGCG CGACTGTGTC GCTGTACTTG
GACTTCCTCA ACCTGTTTAT CTCTATTTTG CACCTACTGG GTGCAGGTAG CGACGATTAA
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| Protein sequence | MTQETLYASH ASTQEVNKLL KNTYLLLSMT LGFSALCAGL AMVLQISPLM SIGLSIGGFI
LLFVTLRKAE SAAGLFWVFA FTGMEGASLG YMLNHYAGMA NGPQLIMQAL GLTAVVFVTL
SGYAITTKKD FSFMRGFLLA GLVIAIVAGI ANIFIGSGAV FMALNAGIAL LMTGFILFDT
SRIVNGGETN YIRATVSLYL DFLNLFISIL HLLGAGSDD
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