| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2013 |
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| Symbol | |
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| ID | 4924264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2329217 |
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| End bp | 2330119 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163586 |
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| Product | putative DNA-binding transcriptional regulator |
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| Protein accession | YP_001094138 |
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| Protein GI | 127512941 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000422246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.025363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCAG AACAGTCGAT GCAATTAATT GATATGGTGG CCCGAGTCGG AAGTTTTACC
GCGGCGGCCA ACAAGTTACA CAAGGTGCCC TCTGCCGTGA GTTATGCCGT GAAGCAGGTT
GAGGAAGATT TGGGGGTCGT GTTGTTTGAG CGCCACCACA GAAGCGTGAG CCTCACCCCG
GCAGGCGAAC ATTTCGTCAA GCAGGTGCGC TCCATGCTTA CCCACTTGGC ATCGCTAAAA
GAAGACACCA AACGCGTGGC CAACGGCTGG CAACCCACAC TCTCAATAGC GCTAGATAAC
ATCGTGCGCG CCGATAAGAT CAGTAACCTA ATCGCCGATT TCTACCGCCA TTTCGACAAT
GTCGAGCTGA TCATACGTAT CGAAGTCTTT AACGGCGTCT GGGAGGCGAT CGCCACCGGT
CGCAGCGACA TCGCCATCGG TGCCACTACC GCGATTCCTG TGGGCGGTGA TTATCGCTTT
AAGGATATGG GCGACATCGA ATGGACCTTC CTGGTGAGTA AGCATCACCC CCTGGCCGCA
ATAGATAGAC CCCTGCTTGA TGATGAGCTG CGCAGCTACC CCTCTATCTG TCTGGAAGAC
ACCTCTCGCG AAATCCCAAA ACGCATGACT TGGCTATTAG ACAATCAGCG CCGCTTAGTC
GTACCAGACT GGATCCGCGC CATCAACTGT TTCCGCGAAG GCCTGGGCAT AGGTTACATG
CCTAAGCACT TCGCCACCCC CTTTGTGCAA GCCGGCGCGC TGATAGAGAA AGAGCTGGAA
CGCCCTAAGG CACCAAGCCC CTGTTGCCTG GCCTGGAACG ACGCCAACAT GTCACCCGCC
ATGGCATGGG TGCTGGACTA TCTAGGCGAT AGCGAAAAAC TACAGCGAGA CTGGTTTAAC
TAA
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| Protein sequence | MLSEQSMQLI DMVARVGSFT AAANKLHKVP SAVSYAVKQV EEDLGVVLFE RHHRSVSLTP
AGEHFVKQVR SMLTHLASLK EDTKRVANGW QPTLSIALDN IVRADKISNL IADFYRHFDN
VELIIRIEVF NGVWEAIATG RSDIAIGATT AIPVGGDYRF KDMGDIEWTF LVSKHHPLAA
IDRPLLDDEL RSYPSICLED TSREIPKRMT WLLDNQRRLV VPDWIRAINC FREGLGIGYM
PKHFATPFVQ AGALIEKELE RPKAPSPCCL AWNDANMSPA MAWVLDYLGD SEKLQRDWFN
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