Gene Shew_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2007 
Symbol 
ID4924258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2319294 
End bp2320373 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content50% 
IMG OID640163579 
Producthypothetical protein 
Protein accessionYP_001094132 
Protein GI127512935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.215237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.122982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATACAG ATTTCTCAAA ACCTGCGCTG GAAGACAAAC TCAACCGGAT CACTTCGATA 
CCACAAAGAT TCAACCAGGG CCTTAAGAAC CTGTGGCAAC GTCTCACTCT GCCACAAAGG
CTCTACCTGC TGGCTGCGCT GCTGCTGATG AGCGAGCATT TAGGCTTAGT GGCCATCATT
ACCACAATTG CCCTCGCCCT GGAGTTTTGG CCTCTGTTTG AGCGTGTCTG GCATTCGCTC
GCCGGTAAGG CGGTATTGCT ACTCTTCTAT GCTATCGTGG CCAACTATGC CCTGGCAATG
GCTGGTGCCA TTGTTAACGA GGTAGTGGGC GTACCGGCAA CGCATTTTAA CTACACCCAT
AACTTTGCCA TCTTGCTGCT TCTGCCCGCC TGGATCCTGG GCATTAGCGC CATCGGACTA
TTGTTTGTCC AGCTGTTGAT GCCTTTCTAT CTCATGATAG CCCTGATGTT AAAACCCGTT
GGTATCAAGC TATTTTCCCT TACCGGCAAC AGTCATTACC GTTTCACCAC TTTGATGGTC
AGATTCGTCC TCTCCTTGGT CTTGCTCTAC CATTTGATCT TGCTAATCGG TGATGTGGAG
GAGAGAGTGG AATCGGCGCT AAACGATTTA AAGACCATTG AGGAATCGGT AAAGGGAGAG
TCGAACAAAG GTCAAGACAA GCAGCTAACC GCAAACACAG ATGAGGTAGC CGCCAATTTA
GAAATGAAGG CGCAACCCAG CGCTGAAGTG TCAGAGAAGG ATGAGGCGTT ATCAAACGCC
GAAACTGCCC AAGAAAAGAC AGATGATCAA CAAACTCGCC AAGCAGAGAG CGAGGCATCG
TTAGCGAAAG AATACGCCTC GCTACGTCAC GCCTATCAGG GTGAGATCCG CGAGTTAATC
GCCGAGTTTG CCTACCGTCT CGAGGCCGAT AGCCGCTCTC GTTGTGAAAA GAGTGAGAAT
GCCAACGTGG TCGAGCTCAA CGACTATGAA ATTCTCGAGG TGGTGCCAGA CAATACGGCA
AAATACCGTT ATCGCTTTAC GGTAAGAAAA TGTATTTCAC CAGCCTTTCC GGCCAAATAG
 
Protein sequence
MNTDFSKPAL EDKLNRITSI PQRFNQGLKN LWQRLTLPQR LYLLAALLLM SEHLGLVAII 
TTIALALEFW PLFERVWHSL AGKAVLLLFY AIVANYALAM AGAIVNEVVG VPATHFNYTH
NFAILLLLPA WILGISAIGL LFVQLLMPFY LMIALMLKPV GIKLFSLTGN SHYRFTTLMV
RFVLSLVLLY HLILLIGDVE ERVESALNDL KTIEESVKGE SNKGQDKQLT ANTDEVAANL
EMKAQPSAEV SEKDEALSNA ETAQEKTDDQ QTRQAESEAS LAKEYASLRH AYQGEIRELI
AEFAYRLEAD SRSRCEKSEN ANVVELNDYE ILEVVPDNTA KYRYRFTVRK CISPAFPAK