| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1992 |
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| Symbol | |
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| ID | 4920956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2304158 |
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| End bp | 2304850 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163561 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094117 |
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| Protein GI | 127512920 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2836] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0778906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGATCGACT TTAGCATTAC CGGCGCCTTC CTCGTCGGCC TGATGGGTGC TGGCCATTGC
ATAGGCATGT GTGGTGGCCT GGTGGGCGCC TTCTCCCAGC AGCTCCCAAG AAAGGCCAGC
GATAATATTC TGCTCGGTCA GCTGCAGTTT ATCTTGAGTT ATAACCTGGG CCGCATTCTC
AGCTATACCC TGGCAGGCGC GCTAGTTGGC GGCTCGGCCA GCCTGCTCAG TACCCTCTTC
AGTATCGATG CTTACCTGAT TGGCATGCGT GTATTTGCCG GTGTGATGAT GATAGTTACC
GGACTCTATA TCGCGCAGAT CTGGTCTGGG GTGGTGCAGA TTGAGCGCGT AGGGAAATTA
TTGTGGCGCT TCATCGGTCC TATTGCGAAT AAGTGGTTAC CGATAACAGA TTTAAAACAA
GCCTTTACGG CAGGTCTGCT ATGGGGCTGG CTGCCCTGTG GCTTGGTCTA TAGCACACTT
ACCTGGGCGG TCGCGGCAAA CTCGGCGCAG CAAGGGGCGA TGATCATGGC GGCCTTTGGC
CTGGGCACCC TGCCGGCGCT GGTCAGTGTC GGCATCGCCG CACGCTATTT TGCCCAGCTA
GTACAGGCAC GAAAAGTAAG GCTTATCAGT GGCTTAATCT TAGTAAGCTT TGGCATACAC
ACTTTGTATA TTGCATTTGC GCAGCTAGGC TAG
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| Protein sequence | MIDFSITGAF LVGLMGAGHC IGMCGGLVGA FSQQLPRKAS DNILLGQLQF ILSYNLGRIL
SYTLAGALVG GSASLLSTLF SIDAYLIGMR VFAGVMMIVT GLYIAQIWSG VVQIERVGKL
LWRFIGPIAN KWLPITDLKQ AFTAGLLWGW LPCGLVYSTL TWAVAANSAQ QGAMIMAAFG
LGTLPALVSV GIAARYFAQL VQARKVRLIS GLILVSFGIH TLYIAFAQLG
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