| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1988 |
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| Symbol | |
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| ID | 4921016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2299988 |
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| End bp | 2300959 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640163557 |
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| Product | cytochrome c oxidase, cbb3-type, subunit III |
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| Protein accession | YP_001094113 |
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| Protein GI | 127512916 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0201798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGTA GCTTCTGGAG TATTTGGATT ACCGTACTCA CAATTGTGGT AATCGCAGGA
TGTTTCATCC TACTGTTTGT TGTCTCTAAA AACACCACAG GTGTTGAAGA AGGCAAATCA
ATGGGTCACA GCTTTGATGG CATTGAAGAG ATCAATAACC CACTGCCTAA GTGGTGGAGT
TATATGTTCT ACATCACCAT CATCTTCGGT GTGGTCTATC TGGCAGCCTA CCCAGGTCTT
GGTAACTATA AAGGTTTCCT AGGCTGGTCA AGCTCGAACC AAAGCATTGG TACTGAAAAA
GGTATCAAGG AAGATTCTGC CGCTGCCGTT GAACTGGCTG CAAATGAACA TCGCTGGGTT
CAGTATGACC AAGAGGTTGA GAAAGCCAAT GCTAAGTACA GCCCGATCTT CGCGGCTTAC
CTAGCTACAC CGCTCGAAGA GCTAGTGAAG AACGAAGAAG CCCTAAAAGT GGGTGGTCGT
CTGTTCCTGC AAAACTGTGC TCAGTGCCAC GGTAGTGACG CACGCGGTAG CAAGGGCTTC
CCTAACCTGA CTGACGGTGA CTGGCTATAT GGCGGCGATC TTGCCACCAT CAAGACCACT
ATCATGAACG GTCGCAACGG CATGATGCCA CCAAAAGGCG GTCTACCTAT CGAAGACAGC
GAGCTGAAAG GCCTGGCTGA ATACGTCGTT AAACTGTCTG GTCGCGACCA CGATGAAGCC
TTGGCCGCAC AAGGTCAGGC ATCATTCATG AAAGGTTGTT TCGCCTGTCA TGGTATGGAC
GGTACTGGTA ACAAGTTCAT GGGTGCACCT AACCTCACCG ACAACACTTG GTTGTACGGC
GGTAGTCGTG GTGTGATCCA AGAGAGCATT AAGAACGGTC GTTCTGGTGT AATGCCTGCT
TGGAAAGATG TCTTGGGCGA AGAGAAAGTT CACGTCATCG CTGCCTATGT TTATAGCTTG
TCAAACAAGT AA
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| Protein sequence | MMSSFWSIWI TVLTIVVIAG CFILLFVVSK NTTGVEEGKS MGHSFDGIEE INNPLPKWWS
YMFYITIIFG VVYLAAYPGL GNYKGFLGWS SSNQSIGTEK GIKEDSAAAV ELAANEHRWV
QYDQEVEKAN AKYSPIFAAY LATPLEELVK NEEALKVGGR LFLQNCAQCH GSDARGSKGF
PNLTDGDWLY GGDLATIKTT IMNGRNGMMP PKGGLPIEDS ELKGLAEYVV KLSGRDHDEA
LAAQGQASFM KGCFACHGMD GTGNKFMGAP NLTDNTWLYG GSRGVIQESI KNGRSGVMPA
WKDVLGEEKV HVIAAYVYSL SNK
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