| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1987 |
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| Symbol | |
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| ID | 4921015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2299821 |
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| End bp | 2299988 |
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| Gene Length | 168 bp |
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| Protein Length | 55 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640163556 |
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| Product | Cbb3-type cytochrome oxidase component |
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| Protein accession | YP_001094112 |
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| Protein GI | 127512915 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00177371 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTACG GCACAGTACA AGGGATTATT ACCATTGTTG TCATGGTGAC GTTTGTCGGT
ATTTTTGCAT GGGCTTATAG CGGTCGCCGT AAAGCGCAGT TTGACGAGGC CGCTAACCTT
GTTTTCTCAG ATGATGAGAA GCACAAGGAC TCAGGAGAAC ATAAGTGA
|
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| Protein sequence | MDYGTVQGII TIVVMVTFVG IFAWAYSGRR KAQFDEAANL VFSDDEKHKD SGEHK
|
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