| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1968 |
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| Symbol | |
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| ID | 4921400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2274225 |
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| End bp | 2275367 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163537 |
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| Product | beta-lactamase |
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| Protein accession | YP_001094093 |
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| Protein GI | 127512896 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.103464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCA ATACGGCCCT GTTGTCATTC GCCGTGTGCT GCTGCGCACT CCTTTTCAAT
GCCTCGACAA TAGCCCAGTC TTATCAACAC CTAGGCGAAA GTTTTCAGCA AAATTTTAAG
AAGCAGCTCA AGGCTAACAA AGTACCCGGC GGCGCCTTTG TGATAGTCCA GGGCGACAAC
ATAGTTACTC TGGATACCTA TGGCAAACGC CATCAAGGCG GTAGCAAGAA GATCAATGCC
GATACTGTGT TTCGCCTGGC ATCCGTCTCA AAAACCTTTG CCGGGGCGCT GGCGAGTCAA
CTGGTGCACG AACATAAACT CAGCTGGCAA CAACCTATCA ATCAATACCT TCCTAACTTT
TCCCTGGCGA AGCCTGCCGA TAGTCAGGCG ATCACCCTGG GCCATGTGAT AGGCCAAAGC
ACAGGCCTGA TGCCAAACAG CTACGATAAC CTGGTTAATG CCAACGTTAA GTTAAACAAG
ATCATTCCCA AATTTGCCGA GCTGACCCCC ATCTGCCCAC CGGGCGTCTG TTACAGCTAT
CAAAACGTCG CCTTCTCCTT TATCGAGCAG GCGATCGAGC AGGAAAGCGG CCAGCCCTAT
GAAGAGTTGA TCGACAAGCG TATCTTCGTG CCACTTGCCA TGGAAACGGC CTCTATCGGC
TATGAGGCCT TTACTCATAC CAGCAATCGC GCCGAGCCTC ATATCAAAAC GAAACATGGA
TTTAAACAGG TTAAGGTGAA ACCTAACTAT TATCAGCTGG CGCCGGCTGC TGGAGTCAAT
GCCAGTATCA AGGATATGGC TAAGTGGCTC ATGGCTAACA TGGGGCATGA ACCTAAGGTG
CTCTCGCCTC AGGTGCTGGA AGATATCACT ACCCCTGGGG TTCGCACCAC TAAGGAGCTG
CGCCGCCGCG ATTGGAAACC CTATCTTGAT GATGCTCACT ACGGCAAGGG CTGGCGCATC
TACCAGTTTA ACGGCCATCG GCTGATCTAC CACGCCGGTT GGGTCGCAGG TTATGTGACC
GAAGTGGCCT ACTCGCCAGA GCTGGATATT GGGATCGCCA TCTTGCTCAA CGGTGAGTCA
CGGGTTATCA GCGCCCTCGG CGCAGAATTT TGGCAGCAGG TGTTCGCCAC TAAGCAAAGT
TAG
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| Protein sequence | MSFNTALLSF AVCCCALLFN ASTIAQSYQH LGESFQQNFK KQLKANKVPG GAFVIVQGDN
IVTLDTYGKR HQGGSKKINA DTVFRLASVS KTFAGALASQ LVHEHKLSWQ QPINQYLPNF
SLAKPADSQA ITLGHVIGQS TGLMPNSYDN LVNANVKLNK IIPKFAELTP ICPPGVCYSY
QNVAFSFIEQ AIEQESGQPY EELIDKRIFV PLAMETASIG YEAFTHTSNR AEPHIKTKHG
FKQVKVKPNY YQLAPAAGVN ASIKDMAKWL MANMGHEPKV LSPQVLEDIT TPGVRTTKEL
RRRDWKPYLD DAHYGKGWRI YQFNGHRLIY HAGWVAGYVT EVAYSPELDI GIAILLNGES
RVISALGAEF WQQVFATKQS
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