| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1965 |
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| Symbol | pssA |
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| ID | 4921397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2269857 |
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| End bp | 2271170 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163534 |
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| Product | phosphatidylserine synthase |
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| Protein accession | YP_001094090 |
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| Protein GI | 127512893 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00603996 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCTGGATA AGCTAGGTGG AATTGCGTTA CCCGCCGACG CCATACGTTG GTTGCTAACG
CCTGCGGCGC TTAAAGCCGA ACTACTCAAA CAGATCGCGA ACGCTAAACG AGCGATCACC
CTTGCCGCAC TCTATCTTGA AGATGATGAG GCGGGCAGGG AAGTGTTGGC TGCCCTGATG
GCGGCCAAGG CAGCCAGACC CGAATTGGAT ATTACCGTTC TGGTTGATTT TCATCGTGCC
AGACGTGGGC TTATCGGCCA TAAGGGTGAC AGCGGCAACT ACCTCATGTA TCAAGAGGTG
GTTAACGCCG CAGAGCATCC GATCAATATT CTTGGCGTAC CGGTAAAGTC CCGCGAATTT
ATGGGCGTAC TCCACCTTAA AGGTTTCATC ATAGATGACA CTGTCATCTA CAGCGGTGCC
AGCCTGAATA ACATCTATCT GCACCAGGGC GAGAAATACC GTTTCGACCG TTACCATGTG
ATCGAATCTA AACCATTGGC TGAATCCATG CGTAACATGG TGATGGAGTA TATCGCCAGT
GACAGAGCCG TTACTTCGCT CACCCAAGAT AGGGCGACCG AAAAGCTGCC GGAAAAGAAT
GATGTTCGCA GCCTGAAACA GCGTCTGGCT AAGGCCAAAT ATCGTTTTGC GAGTACCAAG
ACGGGCAATC GCATCACTCC TGTGGTTGGT TTAGGGCGCA AGAAGAATAA GCTAAACAAG
CTAGTGATCG ATCTGGTATC CCAGTCTCAG CGCTCACTGT TTATCTGCAC GCCCTATTTT
AATCCGCCTT ATATTCTCTC CAGAGCGCTT GCTAAGCATC TGCGAAAAGG CAAACGAATC
GACATCGTAG TTGGCGACAA GACGGCTAAT GACTTTTACA TTCCGCCGGA GGAGAAGTTT
TCGACTATCG GCGCCTTGCC CTACATGTAC GAGCAGTCGC TGCGTAAATT TGCCAAGCGT
CAGCAATGGG CCATTGATGC CGGGCTGCTC AACATTCATC TGTGGAAGCA TGATCGCAAC
AGCTATCACC TTAAAGGAAT TAGCGCCGAT GATCGCCTGC ATCTGATCAC TGGCTCTAAC
CTGAATCCAA GGGCCTGGGC GCTGGATTTA GAAAACGGTT TATTGCTGCA AGATGAAACC
CAAGCCTGGA CGGAAGAGTT CAAACAGGAA CAGGCGCACA TCCTCGAGCA TACCGAGCGT
CTCTATCATT ACAGCCAGAT AGATACCCTG AATAACTATC CTAAGCCGGT ACGCAAGATC
ATGAATCGTA TCAGACGTCT GCGCGCCGAT TTCCTGCTAC GCCGTATCTT GTAA
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| Protein sequence | MLDKLGGIAL PADAIRWLLT PAALKAELLK QIANAKRAIT LAALYLEDDE AGREVLAALM
AAKAARPELD ITVLVDFHRA RRGLIGHKGD SGNYLMYQEV VNAAEHPINI LGVPVKSREF
MGVLHLKGFI IDDTVIYSGA SLNNIYLHQG EKYRFDRYHV IESKPLAESM RNMVMEYIAS
DRAVTSLTQD RATEKLPEKN DVRSLKQRLA KAKYRFASTK TGNRITPVVG LGRKKNKLNK
LVIDLVSQSQ RSLFICTPYF NPPYILSRAL AKHLRKGKRI DIVVGDKTAN DFYIPPEEKF
STIGALPYMY EQSLRKFAKR QQWAIDAGLL NIHLWKHDRN SYHLKGISAD DRLHLITGSN
LNPRAWALDL ENGLLLQDET QAWTEEFKQE QAHILEHTER LYHYSQIDTL NNYPKPVRKI
MNRIRRLRAD FLLRRIL
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