| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1955 |
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| Symbol | ihfB |
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| ID | 4920988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2261338 |
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| End bp | 2261625 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640163524 |
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| Product | integration host factor subunit beta |
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| Protein accession | YP_001094080 |
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| Protein GI | 127512883 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000468135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000320833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGACTAAAT CCGAACTGAT CGAAAAACTT GCCACTAGGC AGTCGCAGCT GTCGGCAAAA
GAAGTAGAAA GCGCTATTAA AGAGATGTTG GAGCAGATGG CAACGACATT GGAAGGCGGT
GACCGTATCG AGATCCGTGG CTTTGGTAGT TTTTCCCTTC ATTATCGTGC ACCACGTACA
GGCCGTAATC CTAAGACCGG CACTTCAGTT GAACTGGAAG GCAAGTATGT ACCGCACTTT
AAGCCTGGCA AAGAACTGCG TGAGCGCGTT GATGCTATCA ACTCGTAA
|
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| Protein sequence | MTKSELIEKL ATRQSQLSAK EVESAIKEML EQMATTLEGG DRIEIRGFGS FSLHYRAPRT
GRNPKTGTSV ELEGKYVPHF KPGKELRERV DAINS
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