Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1953 |
Symbol | cmk |
ID | 4920986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2258806 |
End bp | 2259498 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640163522 |
Product | cytidylate kinase |
Protein accession | YP_001094078 |
Protein GI | 127512881 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000156815 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000548451 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCACAAC GGGCTCCCAT CGTCACTATT GACGGCCCAA GCGGTGCAGG TAAAGGCACT ATTAGTCAGA TACTTGCTTC GCGTTTAGGA TGGAAGCTGC TTGATAGCGG TGCCATATAT CGTGTCTTGG CCCTCGCGGC AATTCACCAC AACGTCGAGT TAGATAACGA AGCCTCGCTG GCCCTGTTAG CCGCGCATTT AGATGTGCAA TTCATTACGG CTAATGGCAA TGGCATTAAA GTGGTCCTGG AAGGCGAGGA TGTATCCCAC GCCATCCGTA GCCAGGAGTG CTCGAATGCA GCCTCAAAAG TCGCGGCTTT CCCCCGCGTT CGTGAGGCGC TTCTTCGTCG TCAGCGCGCC TTTGCCGAGG CTCCAGGTTT GATCGCTGAT GGTCGCGACA TGGGCACGGT CGTTTTTCCC ACAAGCCCAG CTAAACTTTA TTTAACCGCG TCAGCTGAGG AAAGGGCCCA AAGGCGCTAT AATCAGTTGC AGGACAAGGG CTTCGATGTT AATATCGACC GTCTTTTGGC CGAGGTCGTT GAACGCGATG AGCGTGATAT GAATCGCCCG GTCGCTCCTC TGGTTCCTGC CGAGGATGCG CTGGTGATCG ATACGACTGG CATAGGCATT GATGAAGTAG TTGAGCTTGC GCTCTCTCAC ATCAAAGAAA AATTACCTGA TCTTGTTCTC TAG
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Protein sequence | MSQRAPIVTI DGPSGAGKGT ISQILASRLG WKLLDSGAIY RVLALAAIHH NVELDNEASL ALLAAHLDVQ FITANGNGIK VVLEGEDVSH AIRSQECSNA ASKVAAFPRV REALLRRQRA FAEAPGLIAD GRDMGTVVFP TSPAKLYLTA SAEERAQRRY NQLQDKGFDV NIDRLLAEVV ERDERDMNRP VAPLVPAEDA LVIDTTGIGI DEVVELALSH IKEKLPDLVL
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