| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1948 |
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| Symbol | |
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| ID | 4920981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2250750 |
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| End bp | 2251538 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163517 |
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| Product | 3-demethylubiquinone-9 3-methyltransferase |
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| Protein accession | YP_001094073 |
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| Protein GI | 127512876 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.767246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0132888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTATAA TAGCTACATC ATTTATTCCC TTCAGAGGAC TCTCCGTGTC TAACCTTTCT
GAGACAAATT TTTCTGAGAC TAGTAATGCC AATGTCGATC CACAAGAAAT CGCTAAGTTT
GAGAAGATGG CTGCCACTTG GTGGGATCCC GAAGGAGAAT TTAAGCCCAT TCATAAGCTC
AATCCCCTGA GACTCAACTA TATCGATCAA GCCGTTGGCG GTCTGTTTGG TAAGCGTGTG
CTGGATGTTG GCTGCGGCGG CGGTATTCTT TCTGAGAGCA TGGCACGTCT TGGCGCCAGG
GTAGATGGTT TGGACATGGG CGCCGAGCCC CTCGATGTAG CAAAGCTTCA CGCCTTAGAG
ATGGGCGTTG AGATCAACTA TATCCAGGAC ACGGCGGAGC ATCATAGAGA TAGTCATCAG
GGCCAGTATG ATGTGGTCAC CTGCATGGAG ATGCTCGAGC ATGTGCCCGA CCCGGCCTCT
GTTATCAAGG CCTGTAGCGA TATGGTTAAG CCGGGCGGCT ATGTGTTCTT CTCGACCATC
AACCGCAACA TCAGAGCCTA TGTAGAGACT GTGATTGGCG CCGAGTACCT GCTTAAGATG
CTACCGGTAG GTACTCATGA TCATAAGAAG TACATCAAAC CTGCCGAACT TATTGGCATG
GCGGATGCGG TAGATCTCGA GTGTGTCGAT GCGACCGGCA TCACCTACAA TCCGCTGACG
GAGATCTTCC GCTACACCAA GTCGCTAGAT GTCAACTATA TGATCGCCAC GGTTAAGCAG
GATGACTGA
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| Protein sequence | MGIIATSFIP FRGLSVSNLS ETNFSETSNA NVDPQEIAKF EKMAATWWDP EGEFKPIHKL
NPLRLNYIDQ AVGGLFGKRV LDVGCGGGIL SESMARLGAR VDGLDMGAEP LDVAKLHALE
MGVEINYIQD TAEHHRDSHQ GQYDVVTCME MLEHVPDPAS VIKACSDMVK PGGYVFFSTI
NRNIRAYVET VIGAEYLLKM LPVGTHDHKK YIKPAELIGM ADAVDLECVD ATGITYNPLT
EIFRYTKSLD VNYMIATVKQ DD
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