| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1945 |
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| Symbol | nrdB |
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| ID | 4921479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2246079 |
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| End bp | 2247209 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640163514 |
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| Product | ribonucleotide-diphosphate reductase subunit beta |
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| Protein accession | YP_001094070 |
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| Protein GI | 127512873 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.400272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0151301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTATT CAACATTTTG TCAAACACCT AACAATGCCC TGCTGGAACC TATGTTCCTC
GGCCAATCGG TTAACGTTGC CCGTTACGAT ATTCAAAAAT ATGAAGTGTT CGAGAAACTG
ATCGAGAAAC AACTCTCTTT CTTCTGGCGT CCAGAAGAAG TTGACGTCAG CAAAGACAAG
ATCGATTACG CTGCGCTGCC AGATCACGAG AAGCATATCT TCATCTCTAA CCTCAAGTAC
CAGACCCTGC TGGACTCGAT TCAGGGGCGC TCGCCAAACG TTGCCTTCCT GCCGCTGGTG
TCGCTGCCGG AACTTGAGAC CTGGATCGAG ACCTGGTCTT TCTCTGAGAC GATTCACTCA
CGCTCTTACA CCCACATCAT TCGTAATATC GTTAACGATC CTTCAGTGGT GTTTGACGAC
ATCGTGCAGA ACGAAGAGAT CCTCAAGCGC GCCAGCGATA TCGCCGATTA CTACGATAAC
CTGATCGAGC TGAGCCAGAT CTATCACCTG ATGGGTGAAG GCACCCACGA GATCAACGGC
AAGACTGTAG AGGTCACCAC CCGTGCGATC AAGAAAGCCC TCTACCTGTG TATGATGTCG
GTTAACGTGC TCGAAGCGAT CCGTTTCTAC GTCAGCTTCG CCTGCTCATT TGCCTTCGCC
GAGCGCAAGC TGATGGAAGG TAATGCTAAG ATCATCCGCC TCATCGCCCG TGATGAAGCC
CTGCACCTTA ATAGCACACA GCATATCCTT AAGCTGATGC AAGGTGGCAA GGACGACCCA
GAGATGGCCG AGATCGCCAA AGAGTGCGAA CAGACGGCGA TCGACATCTT CGTTAAGGCG
GCAGAGCAAG AGAAAGAGTG GGCCAAGTAC CTGTTCAAAG ACGGCTCTAT GATCGGCCTG
AACGAGCAGA TCCTCTGCCA GTATGTCGAG TACATCACCA ACGAGCGTAT GAAGTCGGTT
AACCTGGTAA GCCCTTATGC CGACCAGAGT AACCCGCTGC CGTGGATGAA GAACTGGCTG
GAGAGTGATT CGGTACAGGT TGCGCCGCAG GAAGTTGAGG TGTCTTCTTA CCTGGTTGGT
CAAATTGACG CGTCTGTCGA TGAGAGTGAG TTTGCCGACT TTGATCTCTA A
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| Protein sequence | MAYSTFCQTP NNALLEPMFL GQSVNVARYD IQKYEVFEKL IEKQLSFFWR PEEVDVSKDK
IDYAALPDHE KHIFISNLKY QTLLDSIQGR SPNVAFLPLV SLPELETWIE TWSFSETIHS
RSYTHIIRNI VNDPSVVFDD IVQNEEILKR ASDIADYYDN LIELSQIYHL MGEGTHEING
KTVEVTTRAI KKALYLCMMS VNVLEAIRFY VSFACSFAFA ERKLMEGNAK IIRLIARDEA
LHLNSTQHIL KLMQGGKDDP EMAEIAKECE QTAIDIFVKA AEQEKEWAKY LFKDGSMIGL
NEQILCQYVE YITNERMKSV NLVSPYADQS NPLPWMKNWL ESDSVQVAPQ EVEVSSYLVG
QIDASVDESE FADFDL
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