| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1932 |
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| Symbol | cls |
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| ID | 4921466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2231216 |
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| End bp | 2232814 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163501 |
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| Product | cardiolipin synthetase |
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| Protein accession | YP_001094057 |
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| Protein GI | 127512860 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.2009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0149178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGCGA TCAGGCTATA TTTAGATTCA ACGCCATTAT CGAATCATAC TCGAGCGAGT
GCAATTCAGG CTCAAGCAGA CATTATGGAA AATGTACATC AAATCCTCGC CATTGCCGGC
GTATTCATCT ATTGGTTGTT TCTTGGCGCC ATCGCGCTGC GCTTGGTGAT TAAACGCCGC
ACCATAGGGG TCTCCTTCTC CTGGATACTG GTGATCTATT TCCTCCCCCT CGTCGGTATC
ATCGCCTACA TTCTCTTTGG CGAGTCGCAC TTGGGGCAAA CCCGAGCGAG TCGCTCCAAG
GCGATGTTCA AACCCTACGG CCAGTGGTTT GCGGCCCTGT ATCAGCATCC GCTGCACACG
CCAGAGCGCC AGAGTGACCA CGCCAGAGCC ATCAGTCAGC TGTGTGATAC TCAGCTCGGT
ATCCCCTCGC TCAGCGGCAA CCAGCTCTGC TTGCAGCATA CGCCATCAAG CATACTCAAT
TCCATCATCC AGGATATCGA CGCGGCCAAG GAGAGCATAG TGATGGAGTT CTACATCTGG
CATCCTGGCG GGTTGGCCGA TGATGTCGCC AGGGCCGTGA TAAAAGCTTC AAAACGTGGT
GTCATAGTAA AACTCTTGCT GGACGCCGCC GGGAGCCGCA CCTTCTTTAA TTCCCCTTGG
CCAACACAGC TACGCAAGGC AGGCATCGAG ATATCTCAGG CCCTCAGCGT TAGTCCCTTG
AGGATGTTCT TCAGGCGCCT AGATCTTCGC CTGCACCGTA AGATAGTGGT TATCGATAAT
CATATCGCCT ACACAGGCTC GATGAACCTT GTAGATCCTA AGTACTTTAA GCAGGGAGAA
GGCGTAGGCC AGTGGATCGA CGTCATGGTG CGCATGGTGG GGCCGGCCGT ACCGCTAGTC
AATACGGTCG CAGCCTGGGA TTGGGAGGTG GAAACCAGCG AGCGTTATTT GCCCGAGCCA
CCGGGCAATC CCGAAAAACC ATATGAACTA TCACACGAGA TATCATATGA GCTATCATGT
GAGCCATCAG GTGAAGTGAG GCGTGAGGCG GATTCCCTGG TACAGGTGAT CCCCTCTGGG
CCGGGTATGC CCGAAGAGGT GATCCACCAG GTGTTGCTAC AGAGTCTCTA CCAGGCTTGC
CGTAAGATAG TGATCACCAC CCCCTACTTT GTGCCCAGCG AGAACCTACT GGATGCCCTA
GTGACTGCGG CGGCGCGAGG CGTCGATGTC AACATCATCA TTCCCCAGAA GAATGACTCG
ACTATGGTCA AATGGGCCAG CCGCTCCTTC TTTGCCGAGC TGCTCAAGGC CGGGGTGAAG
ATCCATAGAT TCAGGGGCGG CCTGCTGCAT ACCAAGTCTG TGTTAATCGA TGATGAGCAC
AGCCTCATTG GCACGGTTAA CATGGATATG CGCAGCCTTT GGCTCAACTT CGAACTAACC
CTTGCAGTAG ATGACAAGGT ATTTGCCGAG GAGTTAAGAG TGCTACAGCA GGGCTATATC
GACAATGCCG AGCAGCTTGA GTACAAGCGT TGGCAGAGTA GACCACTATA TCAGCGGGTG
ATTGAACACC TCTTCTATCT CTTCAGTCCT TTACTTTAA
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| Protein sequence | MIAIRLYLDS TPLSNHTRAS AIQAQADIME NVHQILAIAG VFIYWLFLGA IALRLVIKRR
TIGVSFSWIL VIYFLPLVGI IAYILFGESH LGQTRASRSK AMFKPYGQWF AALYQHPLHT
PERQSDHARA ISQLCDTQLG IPSLSGNQLC LQHTPSSILN SIIQDIDAAK ESIVMEFYIW
HPGGLADDVA RAVIKASKRG VIVKLLLDAA GSRTFFNSPW PTQLRKAGIE ISQALSVSPL
RMFFRRLDLR LHRKIVVIDN HIAYTGSMNL VDPKYFKQGE GVGQWIDVMV RMVGPAVPLV
NTVAAWDWEV ETSERYLPEP PGNPEKPYEL SHEISYELSC EPSGEVRREA DSLVQVIPSG
PGMPEEVIHQ VLLQSLYQAC RKIVITTPYF VPSENLLDAL VTAAARGVDV NIIIPQKNDS
TMVKWASRSF FAELLKAGVK IHRFRGGLLH TKSVLIDDEH SLIGTVNMDM RSLWLNFELT
LAVDDKVFAE ELRVLQQGYI DNAEQLEYKR WQSRPLYQRV IEHLFYLFSP LL
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