| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1931 |
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| Symbol | |
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| ID | 4921259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2230705 |
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| End bp | 2231049 |
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| Gene Length | 345 bp |
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| Protein Length | 114 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640163500 |
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| Product | alkylphosphonate utilization operon protein PhnA |
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| Protein accession | YP_001094056 |
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| Protein GI | 127512859 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2824] Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism |
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| TIGRFAM ID | [TIGR00686] alkylphosphonate utilization operon protein PhnA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00764196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0125839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGATA CAATTCCACC ATGCCCAAAA TGTGAGTCAC CTTATGCCTA TGAAGATGGC
TCATTGTTGA TCTGTCCAGA ATGTGCTCAT GAATGGAACC CTAACGAAGT GGCGGTCGAT
CCCGATGCCA TCATCCTGAA AGATGCGGTA GGCAACCTGT TAGAAGAGGG TGACAAGGTT
ACCCTGATTA AAGATCTTAA GGTGAAGGGC ACTTCACTGA CCCTGAAAGT GGGCACCAAG
GCGGTGATCA ACCGTTTCGT CGACGCCGAC CACGATATCG ACTGTAAGGT TGATGGTCAC
GGCCAGATGA TGCTGAAATC TAAGTTCGTG AAGAAGCAGA GCTAA
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| Protein sequence | MSDTIPPCPK CESPYAYEDG SLLICPECAH EWNPNEVAVD PDAIILKDAV GNLLEEGDKV
TLIKDLKVKG TSLTLKVGTK AVINRFVDAD HDIDCKVDGH GQMMLKSKFV KKQS
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