Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1928 |
Symbol | |
ID | 4921256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2226384 |
End bp | 2227451 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640163496 |
Product | quinolinate synthetase |
Protein accession | YP_001094053 |
Protein GI | 127512856 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0379] Quinolinate synthase |
TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0143239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAG TAGCACCAAG CATCGAAAAT ATTCAGTATC CGTTTCCAGC AAAGCCCATT CCCCTAAGCG ATAGCGAGAA GCATGCCTAC AAGGCGCGCA TCAAGCAGCT GTTGAAGGAG AAAGAGGCTG TCTTGGTAGC CCACTACTAT ACCGACCCTG AGATCCAGGC GCTGGCGGAA GAGACCGGCG GCTGTGTGTC GGACTCTCTA GAGATGGCCC GCTTCGGTCG TGACCATCCA GCCAAGACGC TGATCGTGGC CGGGGTTAAG TTTATGGGCG AGACTTCTAA GATCTTAAGC CCGGAAAAGA CTGTGCTTAT GCCAACCTTG GATGCCACCT GCTCACTGGA CGTAGGCTGT CCTATCGACA CCTTTAGCGC CTTCTGTGAT GCCCATCCAG ACCATACCGT CGTGGTATAT GCCAACACCT CGGCCGCCGT TAAGGCGCGG GCCGACTGGG TAGTGACCTC GAGTATCGCC CTTGAGATCG TCGAGCATCT CGATAGCCAA GGTAAGAAGA TCATCTGGGG ACCTGACCGT CACCTGGGAA GCTATATCGC CAAGCAGACT GGCGCCGACA TGCTGATGTG GCAGGGCGAG TGTATCGTGC ACGATGAGTT CAAGGCCAAG GCGCTGCGTC AGTTAAAAGA GCAGTATCCT AATGCGGCTG TGTTGGTGCA CCCCGAATCA CCGGCGAGCG TGGTTGAGAT GGCCGATGCC GTTGGCTCCA CCAGTCAGCT GATCAAGGCG GCGCAGAGCC TGGAGAACGA CATCTTTATT GTGGCTACCG ATAAGGGGAT CTTCTACAAG ATGCAACAGG CGGCGCCGAA CAAGACCCTG ATCGAGGCGC CCACCGGCGG TAACGGCGCG ACCTGTCGTA GCTGTGCCCA CTGTCCTTGG ATGGCGATGA ACGGCCTTAA GGCAATCGAG GCGGCATTGA TTAACGATGG TTCGGAGCAA CACGAGATCT TCGTCGATGA GTCGCTTAGA GAGCGTGCAC TGTTGCCGCT CGATCGTATG CTAGATTTTG CCAAGACGCT GAACATGCAG GTTAAAGGTA ACGCCTAG
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Protein sequence | MSQVAPSIEN IQYPFPAKPI PLSDSEKHAY KARIKQLLKE KEAVLVAHYY TDPEIQALAE ETGGCVSDSL EMARFGRDHP AKTLIVAGVK FMGETSKILS PEKTVLMPTL DATCSLDVGC PIDTFSAFCD AHPDHTVVVY ANTSAAVKAR ADWVVTSSIA LEIVEHLDSQ GKKIIWGPDR HLGSYIAKQT GADMLMWQGE CIVHDEFKAK ALRQLKEQYP NAAVLVHPES PASVVEMADA VGSTSQLIKA AQSLENDIFI VATDKGIFYK MQQAAPNKTL IEAPTGGNGA TCRSCAHCPW MAMNGLKAIE AALINDGSEQ HEIFVDESLR ERALLPLDRM LDFAKTLNMQ VKGNA
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