| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1927 |
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| Symbol | |
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| ID | 4921255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2224702 |
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| End bp | 2226264 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163495 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001094052 |
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| Protein GI | 127512855 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0146136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAG ATTTTATTTT GCCCGATATT GGCGAGGGCG TGGTGGAGTG TGAGCTGGTC
GAGTGGTTGG TTGCCGAAGG CGATATCGTC ACCGAAGATC AGCCCATTGC CGACGTGATG
ACAGATAAGG CGCTGGTGCA GATCCCGGCG GTTCATGGTG GTGTCATCAA AAAACTTCAC
TATAAGAAAG GTGACATAGC TATCGTTCAC GAGCCGCTCT ATTCAGTGGA AATCGATGGT
GAGTTAGACG GCGATGCGAC CACAGAATCA GCAGCTGAAG AAGCTGTCGT TCAATCTGAT
TCACAGCCAG TTGTTGGCGG CAAACGTGTC GAAGAGTTCC TGTTACCGGA TATCGGTGAA
GGGATTGTCG AGTGCGAGTT GGTGGAGTGG TTGGTGGCCG AAGGTGACAT GGTGGTGGAA
GACCAACCTA TCGCCGATGT GATGACCGAC AAGGCACTGG TGCAGATCCC GGCCATCAAG
AGCGGTAAGG TGGTTAAACT CCATTACCGT AAGGGTCAGC TGGCACAGGT GCACACCCCG
CTTTTCTCTA TCGAGGTAGA GAGCGAAGAG GGGATCGTTG CCGCGCCGGT AGCAGATACT
GCCCCAGCTG CGGTTGACCA TGAAGAGGTT GAACTGCACG CCCCAGCCGG TAATGGTAAG
GCGCTGGCAA GCCCGGCCGT GCGTCGTCTG GCGCGCAGCT ATGATATCGA TCTCAGCCTG
GTGCCGGGTT CTGGTAAACA TGGCCGAGTC TATAAGGAAG ATGTCGAGCG CTTCCGTAGC
GGCGAAGCCG TGAAGGCTAA GGCGGCGAAA GCACAGGCCC AAAGCGAGCC AACAGCTGCG
CCTATAGCGG TTTCAGCAGG CGATCGCGTC GAGCCGATCC GCGGCGTCAA GGCGGTCATG
GCCAAAATGA TGACAGAGTC TGTCTCTACC ATCCCGCACT TCACCTATTG TGAAGAGCTG
GATCTGACCG AGCTGGTTGC GCTTCGCGAA TCGATGAAGG CGCGCTACTC GAGCGACGAT
CTCAAGCTGA CCATGATGCC TTTCTTCATG AAGGCGATGT CGCTTGCCCT GACTCAGTTC
CCTGGCATCA ACAGCCGTGT GAACGACGAT TGCACCGAGC AGACCTTCCT GGCGTCACAC
AACATAGGCA TGGCGGTAGA CTCTAAGGTG GGTCTATTGG TGCCAAACGT GAAGGATGTG
CAGCAAAAGT CGATTCTTGA GGTCGCGGCC GAAATTACCC GCCTGACCAA GGATGCCCGC
AGCGGTCGTG TCAGCCCGGC AGACCTTAAG GGCGGCAGCA TCTCCATCTC AAATATCGGC
GCCTTGGGGG GGACTGTGGC AACGCCTATT ATCAACAAGC CTGAGGTGGC CATCGTTGCC
CTGGGTAAGT TGCAGACACT GCCACGCTTC AACGATAAGG GTGAGGTCGA GGCCCGTAAG
ATCATGCAGA TCAGCTGGTC TGGCGATCAC CGTGTGATAG ACGGCGGCAC CATAGCGCGC
TTCTGCAACC TGTGGAAGCA GTATCTTGAG TCACCACAGG AGATGTTACT GGCGATGCAC
TAA
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| Protein sequence | MIKDFILPDI GEGVVECELV EWLVAEGDIV TEDQPIADVM TDKALVQIPA VHGGVIKKLH
YKKGDIAIVH EPLYSVEIDG ELDGDATTES AAEEAVVQSD SQPVVGGKRV EEFLLPDIGE
GIVECELVEW LVAEGDMVVE DQPIADVMTD KALVQIPAIK SGKVVKLHYR KGQLAQVHTP
LFSIEVESEE GIVAAPVADT APAAVDHEEV ELHAPAGNGK ALASPAVRRL ARSYDIDLSL
VPGSGKHGRV YKEDVERFRS GEAVKAKAAK AQAQSEPTAA PIAVSAGDRV EPIRGVKAVM
AKMMTESVST IPHFTYCEEL DLTELVALRE SMKARYSSDD LKLTMMPFFM KAMSLALTQF
PGINSRVNDD CTEQTFLASH NIGMAVDSKV GLLVPNVKDV QQKSILEVAA EITRLTKDAR
SGRVSPADLK GGSISISNIG ALGGTVATPI INKPEVAIVA LGKLQTLPRF NDKGEVEARK
IMQISWSGDH RVIDGGTIAR FCNLWKQYLE SPQEMLLAMH
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