| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1924 |
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| Symbol | |
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| ID | 4921252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2221280 |
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| End bp | 2222347 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163492 |
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| Product | succinylglutamate desuccinylase |
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| Protein accession | YP_001094049 |
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| Protein GI | 127512852 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2988] Succinylglutamate desuccinylase |
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| TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.693854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00111051 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCGAGACA CCCTGATGTT GTCGAAAGAC TTTTTGCAAT TGACACTAGA CAATCCTGTC
GGCCTCGAGG CGTTTGAATT TACCCTAGGG CAACACACAC AGGTGTCGGT ATGGGATACC
GGCGTCATCC AATTTGAGCC GCTCGTTACG TATGAAGCTA ATCAAGAGAG CGAGCAAGAT
GGAAAGGAAG AAGCCCTTAA GAGCATAGTG CTCTCGTCGG CGGTTCATGG TAACGAGACG
GCGCCAATCG AGCTGTGTGA TCAGCTTATT ACTGCGCTGC TGTCTGAGAC GCTGATTGCC
CGTCATCGCC TGCTGTTTCT GATCGGTAAC CCTCCAGCTA TCCTAAACGG TACCCGTTTC
GTTGAAGAGA ACCTCAATCG TCTCTTCAGC GGCGCCCACG CCAAAGGCGA GAGCAATGCC
GAGCGGGTAC GCGCTAAGAA GCTAGAGCAG TATGTGGATC GCTTCTTCAA CGCGGCGCCA
AAAGACGGCA GTCGTTATCA CTACGACCTG CACACGGCAA TACGCGCCTC TAAGCATGAG
AAGTTTGCCA TCTATCCTTA TCCACACGGC GCACCTTACA GCGGCGAGCA GATCATGTTC
CTGGCCGCCT GCGGCATCAA CACAGTGCTG TTTCACCACG AACCTACCAC CACCTTTAGT
TACTTCTCTG CCCATGGCTA TCAGGCCCAT GCCTTTACCA TAGAGCTTGG CAAGGTAATG
CCCATGGGGC AGAACGATAT GACGCGCTTT ATCGCGGTGA AAGAGATGTT GACCCGTCTG
GTAAGCGGCC GGGACCTCGA GCTCGGTGAG TTTGACCCGA GCCAGGTGAA TCTGTATCAG
GTTCATCGCT CAATCAATAA GCAGTTTGAC GACTTTAGCT TTACCTTTGC CGACGACGTA
GAGAATTTTA CGGCGTTTCC AAGAGGTTAT ATATTGGCTA AGGATGGCGG GACTGAGATT
AAGGTCGAGG CCGAATCTGA GTCCATCGTG TTTCCCAACG CCAATGTGCC GGTTGGCCAG
CGCACTGTGC TGTGTTTAGT GCCTGCCAAA GATTATCGCG TGGTTTAG
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| Protein sequence | MRDTLMLSKD FLQLTLDNPV GLEAFEFTLG QHTQVSVWDT GVIQFEPLVT YEANQESEQD
GKEEALKSIV LSSAVHGNET APIELCDQLI TALLSETLIA RHRLLFLIGN PPAILNGTRF
VEENLNRLFS GAHAKGESNA ERVRAKKLEQ YVDRFFNAAP KDGSRYHYDL HTAIRASKHE
KFAIYPYPHG APYSGEQIMF LAACGINTVL FHHEPTTTFS YFSAHGYQAH AFTIELGKVM
PMGQNDMTRF IAVKEMLTRL VSGRDLELGE FDPSQVNLYQ VHRSINKQFD DFSFTFADDV
ENFTAFPRGY ILAKDGGTEI KVEAESESIV FPNANVPVGQ RTVLCLVPAK DYRVV
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