| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1912 |
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| Symbol | |
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| ID | 4921634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2210118 |
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| End bp | 2211443 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163480 |
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| Product | deoxyguanosinetriphosphate triphosphohydrolase-like protein |
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| Protein accession | YP_001094037 |
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| Protein GI | 127512840 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0232] dGTP triphosphohydrolase |
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| TIGRFAM ID | [TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00809428 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000248153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACATCAG CCATCTGGCA TGAGAGACGC TTGGGCGAAG AGAAACTCAG GCGCAACGAC
CACCGCAGCC CCTATCAGCG CGATCGCGCC CGCATTCTAC ACTCGGCCGC CTTCAGACGT
TTGCAGGCCA AGACTCAGGT GCTGGGTGTC GGCATGAACG ACTTCTATCG CACCCGCCTC
ACCCACTCGC TGGAGGTATC GCAGATAGGC ACAGGGATCT GCGCCCAGCT CAAACAGAAA
TACCCAGATC TGCATCATCT GCTCGACTCC ATGAGCCTGA TAGAATCCCT CTGTCTGGCC
CACGACATAG GCCATCCTCC CTTTGGTCAC GGCGGTGAGG TCGCGCTCAA CTATATGATG
CGCAGCGATG GCGGCTTCGA GGGCAACGGA CAGACATTCA GGATCCTCAC CGCGCTCGAG
CCTTATACCC AGCACTTTGG CATGAACCTC ACCCGGCGTA CCTTGCTGGG GATCCTTAAA
TATCCCGCCA GCCACAATGA ACTGTATCAG TCCCAGCCAA GGCCAGAGGT CGACAGCTAT
CGTCAACTTA AGCCAAGCCA GTGGCGTCCG GTTAAAGGGA TCTTCTTTGA GGACAAGCCT
GTGCTCGACT GGGTACTCGA GCCGCTATCG ACCCAAGACA GAGAGCGATT CGTCTCGGCA
GAGCCAGGGG AAAGAGATCA ACACAGACGC ACCCGGTATA AGTCGCTCGA TTGCTCCATC
ATGGAGCTCG CAGACGATAC CGCCTATGCC ATTCACGATC TCGAAGATGC CATCGTCATG
GGCATCGTCA CCCAGGCCAT GTGGCAGCAA GATGTGTCCA GCCTGCTAGC GGGCAGCGAC
GATGAATGGA TTGCCAAGGA GTTTGCCACC ATTGGCGATA AGCTGTTTGC GCTGGAAAAT
CACCTGCGCA AAGACGCCAT AGGTACCCTG GTCAACGGTT TCGTCACCGC CATCTTGATC
GATGAAAACC CCAATTTTAT CGAGCCGCTA CTCAGATATA ACGCCCGCCT GGAGCCCCCC
TTCGCCGAGG CGCTCCATGT ACTTAAGCAG TTTGTCTATA AGCGGGTGAT CCGCAAACCC
GAGATCCAGA TGCTGGAATA TAAGGGCCAG CAGATAGTGA TGGAGCTGTT CGAGGCCTTC
GCCTCGGATC CCGAGCGTCT GTTACCGCTC AATACCCAGG AGCGCTGGCA ACAGATGGCC
CAGCAAGAAG GCAACTGCAA CCGGGTGATC GCCGACTACA TCTCGGGAAT GACAGATGAG
TTTGCCGCCC GCCTGCACCA ACATCTGTTT AGTGCCAAGG CGGGATCCCT GATCGATCTG
CAGTAA
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| Protein sequence | MTSAIWHERR LGEEKLRRND HRSPYQRDRA RILHSAAFRR LQAKTQVLGV GMNDFYRTRL
THSLEVSQIG TGICAQLKQK YPDLHHLLDS MSLIESLCLA HDIGHPPFGH GGEVALNYMM
RSDGGFEGNG QTFRILTALE PYTQHFGMNL TRRTLLGILK YPASHNELYQ SQPRPEVDSY
RQLKPSQWRP VKGIFFEDKP VLDWVLEPLS TQDRERFVSA EPGERDQHRR TRYKSLDCSI
MELADDTAYA IHDLEDAIVM GIVTQAMWQQ DVSSLLAGSD DEWIAKEFAT IGDKLFALEN
HLRKDAIGTL VNGFVTAILI DENPNFIEPL LRYNARLEPP FAEALHVLKQ FVYKRVIRKP
EIQMLEYKGQ QIVMELFEAF ASDPERLLPL NTQERWQQMA QQEGNCNRVI ADYISGMTDE
FAARLHQHLF SAKAGSLIDL Q
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