Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1905 |
Symbol | |
ID | 4921627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2200934 |
End bp | 2202991 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640163473 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_001094030 |
Protein GI | 127512833 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.82841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000502877 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTATAA CAATGAAAAA AACTGCAATC ATACTTGCCT TGGCGACAGC CGGTCTGGTG TCTGGCGCTC ACGCCGCAGC ACCAGAGCCT TTCAAGGTAC AACATCTCGT TAAAATGAAT AAGCTGCATT CCAGTGCACT GTCTAATGAC GGCACTAAAA TCGTGTATGC AGTTAAAAAA TTTGATGATA AGGGTGAGGC ACAATCTGAC CTTTATCTTC AGTCGCTGAT CGATGGCAAG GTAAAACGCC TGACCTCGGC CAAAGGTACT GAGCATAGCG TTGCCTTTAG CGCAGACGAT AAGAAGATCT ACTTCCTAGC GGCGCGCGAT GGCAGCTCAC AGCTGTATGA GCTGGCACTC GATGGCGGCG AAGCGGTTAA GATCTCTAAT CTGCCGCTGG ACGTTGAAGG CTTTAAGCTG TCTCAAGATG GCGCTCAGGT CGTGATGAAC ATGCGTGTCT ACCCTGAGTG TGACACCTTG CAGTGCACCG CCGACAAGCG AGAGCAAGAA GCCGAGCGTA AATCTACCGG CCGCGAATAC AAGCAGCTGA TGGTGCGCCA CTGGGATACC TGGGGTGACC ACAGCCGCAG CCACCTGTTT GTGGCAAAAC TTGACGGCAA GATGATCGAC ACTGCCGTGG ATGTGACTAA AGGCCTGGAT ACAGAAACTC CGCCACTGCC ATTTTCTGGC ATGGAAGAGG TGACCTTTAC CCCAGACGGT AAGTATGTGG TCTACAGCGC CAAGGCGCCG AGCAAGTCAC AGGCTTGGGA AACTAACTAT GACCTGTGGC AGGTCTCAGT GCTTGGCGGT GAGGCGAAAA ACCTGACCGA GAGCAACAAG GCGTGGGATG CCCAGCCAAC CTTCTCGGCG GACGGTCGTT ACCTGGCGTA TCTCGCCATG AGCAAGCCAG GCTTTGAGGC GGATCGTTAC CGCGTCATGC TGCGTGATAC TGTGACCGGC CAAGAGAAAG AAGTGGCGCC GCTGTGGGAT CGCAGCCCAA GCTCGCTGAC TTTCGGCGCA GATAACCGCA CACTTTATGT GACGGCGCAG GACCTGGGCC AGGTGAGCAT CTTCGAGGTC AACACTCAAT TTGGTGACGT GAAGACGCTG CACAACGATG GCAGCAACAG CATCCTGGGT GTGACCGGCG ACAAGATCGT CTTCAACCAC AAGAGTCTGG TTGAGCCAGG CGATCTCTAT ACCATGTCTC TCGACGGTCA GAATGTAAAT CGCCTGACCG AGGTGAACAA AGACAACCTG GCCAAGATCA AGTTTGGCGA GTTTGAACAG TTCAGCTTCA AGGGCTGGAA CAACGAAGAG GTCTATGGTT ACTGGATCAA GCCTGCTAAC TACAAGCAAG GCAAGAAGTA TCCTGTTGCC TTCTTGGTAC ACGGTGGCCC ACAAGGCTCA TTCGGCAACT CATTCAGCAG CCGCTGGAAC GCTCAACTTT GGGCGGGTGC CGGTTACGGT GTGGTGATGA TCGATTTCCA CGGTTCTACC GGTTATGGTC AGGCCTTCAC CGACTCTATC TCTAAGGATT GGGGCGGCAA GCCGCTGGAA GATCTACAGA AAGGTCTAGC TGCGGTTACC GCTCAGCAGA AGTGGCTAGA TGGCGATCGC GCCTGCGCCC TGGGTGGTTC ATACGGCGGC TACATGATGA ACTGGATCCA AGGTAACTGG AACGACGGCT TCAAGTGTCT GGTTAACCAC GCGGGACTGT TCGACATGCG CTCTATGTAC TATGTGACCG AAGAGCTGTG GTTCCCTGAG TATGAATTCG GTGGCACCTA CCAGGACAAC AAGGAATTGT TCGAGAAGTT TAACCCGGTT AACTATGTCG ATAATTGGCA GACGCCTATG CTGGTGATCC ATGGTGAGAA GGACTTCCGT GTGCCTTATG GTCAGGGTCT GGCGGCGTTT AGCTTCATGC AGCGTAAAGG GATCCCATCT GAATTGCTTA TCTACCCAGA TGAGAACCAC TGGATCCTTA ACCCAGACAA CCTGGAGCAA TGGTACGCCA ACGTCCTAGG CTGGATGGAT CGCTGGACCA AGAAGTAA
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Protein sequence | MTITMKKTAI ILALATAGLV SGAHAAAPEP FKVQHLVKMN KLHSSALSND GTKIVYAVKK FDDKGEAQSD LYLQSLIDGK VKRLTSAKGT EHSVAFSADD KKIYFLAARD GSSQLYELAL DGGEAVKISN LPLDVEGFKL SQDGAQVVMN MRVYPECDTL QCTADKREQE AERKSTGREY KQLMVRHWDT WGDHSRSHLF VAKLDGKMID TAVDVTKGLD TETPPLPFSG MEEVTFTPDG KYVVYSAKAP SKSQAWETNY DLWQVSVLGG EAKNLTESNK AWDAQPTFSA DGRYLAYLAM SKPGFEADRY RVMLRDTVTG QEKEVAPLWD RSPSSLTFGA DNRTLYVTAQ DLGQVSIFEV NTQFGDVKTL HNDGSNSILG VTGDKIVFNH KSLVEPGDLY TMSLDGQNVN RLTEVNKDNL AKIKFGEFEQ FSFKGWNNEE VYGYWIKPAN YKQGKKYPVA FLVHGGPQGS FGNSFSSRWN AQLWAGAGYG VVMIDFHGST GYGQAFTDSI SKDWGGKPLE DLQKGLAAVT AQQKWLDGDR ACALGGSYGG YMMNWIQGNW NDGFKCLVNH AGLFDMRSMY YVTEELWFPE YEFGGTYQDN KELFEKFNPV NYVDNWQTPM LVIHGEKDFR VPYGQGLAAF SFMQRKGIPS ELLIYPDENH WILNPDNLEQ WYANVLGWMD RWTKK
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