| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1905 |
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| Symbol | |
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| ID | 4921627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2200934 |
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| End bp | 2202991 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163473 |
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| Product | peptidase S9 prolyl oligopeptidase |
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| Protein accession | YP_001094030 |
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| Protein GI | 127512833 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.82841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000502877 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTATAA CAATGAAAAA AACTGCAATC ATACTTGCCT TGGCGACAGC CGGTCTGGTG
TCTGGCGCTC ACGCCGCAGC ACCAGAGCCT TTCAAGGTAC AACATCTCGT TAAAATGAAT
AAGCTGCATT CCAGTGCACT GTCTAATGAC GGCACTAAAA TCGTGTATGC AGTTAAAAAA
TTTGATGATA AGGGTGAGGC ACAATCTGAC CTTTATCTTC AGTCGCTGAT CGATGGCAAG
GTAAAACGCC TGACCTCGGC CAAAGGTACT GAGCATAGCG TTGCCTTTAG CGCAGACGAT
AAGAAGATCT ACTTCCTAGC GGCGCGCGAT GGCAGCTCAC AGCTGTATGA GCTGGCACTC
GATGGCGGCG AAGCGGTTAA GATCTCTAAT CTGCCGCTGG ACGTTGAAGG CTTTAAGCTG
TCTCAAGATG GCGCTCAGGT CGTGATGAAC ATGCGTGTCT ACCCTGAGTG TGACACCTTG
CAGTGCACCG CCGACAAGCG AGAGCAAGAA GCCGAGCGTA AATCTACCGG CCGCGAATAC
AAGCAGCTGA TGGTGCGCCA CTGGGATACC TGGGGTGACC ACAGCCGCAG CCACCTGTTT
GTGGCAAAAC TTGACGGCAA GATGATCGAC ACTGCCGTGG ATGTGACTAA AGGCCTGGAT
ACAGAAACTC CGCCACTGCC ATTTTCTGGC ATGGAAGAGG TGACCTTTAC CCCAGACGGT
AAGTATGTGG TCTACAGCGC CAAGGCGCCG AGCAAGTCAC AGGCTTGGGA AACTAACTAT
GACCTGTGGC AGGTCTCAGT GCTTGGCGGT GAGGCGAAAA ACCTGACCGA GAGCAACAAG
GCGTGGGATG CCCAGCCAAC CTTCTCGGCG GACGGTCGTT ACCTGGCGTA TCTCGCCATG
AGCAAGCCAG GCTTTGAGGC GGATCGTTAC CGCGTCATGC TGCGTGATAC TGTGACCGGC
CAAGAGAAAG AAGTGGCGCC GCTGTGGGAT CGCAGCCCAA GCTCGCTGAC TTTCGGCGCA
GATAACCGCA CACTTTATGT GACGGCGCAG GACCTGGGCC AGGTGAGCAT CTTCGAGGTC
AACACTCAAT TTGGTGACGT GAAGACGCTG CACAACGATG GCAGCAACAG CATCCTGGGT
GTGACCGGCG ACAAGATCGT CTTCAACCAC AAGAGTCTGG TTGAGCCAGG CGATCTCTAT
ACCATGTCTC TCGACGGTCA GAATGTAAAT CGCCTGACCG AGGTGAACAA AGACAACCTG
GCCAAGATCA AGTTTGGCGA GTTTGAACAG TTCAGCTTCA AGGGCTGGAA CAACGAAGAG
GTCTATGGTT ACTGGATCAA GCCTGCTAAC TACAAGCAAG GCAAGAAGTA TCCTGTTGCC
TTCTTGGTAC ACGGTGGCCC ACAAGGCTCA TTCGGCAACT CATTCAGCAG CCGCTGGAAC
GCTCAACTTT GGGCGGGTGC CGGTTACGGT GTGGTGATGA TCGATTTCCA CGGTTCTACC
GGTTATGGTC AGGCCTTCAC CGACTCTATC TCTAAGGATT GGGGCGGCAA GCCGCTGGAA
GATCTACAGA AAGGTCTAGC TGCGGTTACC GCTCAGCAGA AGTGGCTAGA TGGCGATCGC
GCCTGCGCCC TGGGTGGTTC ATACGGCGGC TACATGATGA ACTGGATCCA AGGTAACTGG
AACGACGGCT TCAAGTGTCT GGTTAACCAC GCGGGACTGT TCGACATGCG CTCTATGTAC
TATGTGACCG AAGAGCTGTG GTTCCCTGAG TATGAATTCG GTGGCACCTA CCAGGACAAC
AAGGAATTGT TCGAGAAGTT TAACCCGGTT AACTATGTCG ATAATTGGCA GACGCCTATG
CTGGTGATCC ATGGTGAGAA GGACTTCCGT GTGCCTTATG GTCAGGGTCT GGCGGCGTTT
AGCTTCATGC AGCGTAAAGG GATCCCATCT GAATTGCTTA TCTACCCAGA TGAGAACCAC
TGGATCCTTA ACCCAGACAA CCTGGAGCAA TGGTACGCCA ACGTCCTAGG CTGGATGGAT
CGCTGGACCA AGAAGTAA
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| Protein sequence | MTITMKKTAI ILALATAGLV SGAHAAAPEP FKVQHLVKMN KLHSSALSND GTKIVYAVKK
FDDKGEAQSD LYLQSLIDGK VKRLTSAKGT EHSVAFSADD KKIYFLAARD GSSQLYELAL
DGGEAVKISN LPLDVEGFKL SQDGAQVVMN MRVYPECDTL QCTADKREQE AERKSTGREY
KQLMVRHWDT WGDHSRSHLF VAKLDGKMID TAVDVTKGLD TETPPLPFSG MEEVTFTPDG
KYVVYSAKAP SKSQAWETNY DLWQVSVLGG EAKNLTESNK AWDAQPTFSA DGRYLAYLAM
SKPGFEADRY RVMLRDTVTG QEKEVAPLWD RSPSSLTFGA DNRTLYVTAQ DLGQVSIFEV
NTQFGDVKTL HNDGSNSILG VTGDKIVFNH KSLVEPGDLY TMSLDGQNVN RLTEVNKDNL
AKIKFGEFEQ FSFKGWNNEE VYGYWIKPAN YKQGKKYPVA FLVHGGPQGS FGNSFSSRWN
AQLWAGAGYG VVMIDFHGST GYGQAFTDSI SKDWGGKPLE DLQKGLAAVT AQQKWLDGDR
ACALGGSYGG YMMNWIQGNW NDGFKCLVNH AGLFDMRSMY YVTEELWFPE YEFGGTYQDN
KELFEKFNPV NYVDNWQTPM LVIHGEKDFR VPYGQGLAAF SFMQRKGIPS ELLIYPDENH
WILNPDNLEQ WYANVLGWMD RWTKK
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