| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1893 |
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| Symbol | |
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| ID | 4921773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2187086 |
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| End bp | 2187505 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163461 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094018 |
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| Protein GI | 127512821 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0432] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.323991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGATTC AAGTCGAGAT AAATCTAGCC CCGAGACAGC GCGGTTATCA TCTGATCACC
GAAGAGATCT ATCGCGCCGC TCCCCAGCTT AGCGAGATCA AGATAGGTCT CGCCCATCTC
CTGTTACAGC ATACCTCGGC GGGACTCACG CTCAACGAAA ATGCCGACCC CAGTGTGCGG
GAGGACTTCG AGCGCTTCTT TAACCGTCTA GTGCCGGAGA ATGAGCCCTA CTACACCCAT
ACCTATGAGG GTGATGACGA CATGCCGGCA CATCTTAAGT CATCCCTGCT GGGCTGCGAG
CTTACCCTGC CGATAACCGA CGGCGAGTTT AATCTGGGTA CCTGGCAAGG GGTCTACCTG
TGTGAGGCCC GCAACCGCGC CAGTGGCCGC ACCTTAATAC TCACCATCCA GGGCGAGTAG
|
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| Protein sequence | MWIQVEINLA PRQRGYHLIT EEIYRAAPQL SEIKIGLAHL LLQHTSAGLT LNENADPSVR
EDFERFFNRL VPENEPYYTH TYEGDDDMPA HLKSSLLGCE LTLPITDGEF NLGTWQGVYL
CEARNRASGR TLILTIQGE
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