| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1875 |
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| Symbol | |
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| ID | 4922127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2157984 |
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| End bp | 2159513 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163443 |
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| Product | peptidase M28 |
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| Protein accession | YP_001094000 |
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| Protein GI | 127512803 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.967408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.215425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATCA AGGCATCTAT CGGGAAGACC CTAGTATTTA CGGCCATCTG TGCTGGCACC
GCCCATGCGG CCCCTCCGGC CACACCACTG CATCATGCAG GAAGCAGCCA TACACTATTA
AGCCAAAACG CACTAAGCCA AAGCGCGCTT AACCAGAGCG AGCTTAACCA GAGTGCACTG
GGCCAGAGTC CTTATGCGGC ACCCTCCCAA GAAGATCTTC GCCTGTATGA GATTGCCGGT
GCGCCGCAGC CTGCACGCAT ACTGCAAGAT ATACAAACCT TAGTGAATTT TGGCACCCGC
CATACCCTAT CGAGTCAGAC GGATAAAGAT CGCGGCATAG GCGCGGCCAG AAACTGGATC
AAGGCCGAGT TTGAACGTAT CTCCGCCGCC TGCGATCACT GCCTTGAGGT GATAGAAGTT
GGCGACACAG TATCAGGCAA GCGCATTCCC GAGCCAACAC GTGTGGTGAA TATCATCGCC
ATTCAACGTG GCACCTTAGA CCCCAACCGC GTGGTGATGA TGAGCGGCGA TATCGACTCT
CGGGTCAGCG ACGTGATGGA CGCCAGCTCC TTCTCCCCTG GCGCCAACGA TAACGCCTCG
GGGGTCGCAG GTGCCATGGA GGCCGCTCGC GTCCTCAGCC AGTATCAGTT TGGTGGCACC
ATAGTCTACG CGGCGCTATC GGGCGAAGAG CAAGGCCTTT ATGGCGGCGC CGGACTGGCC
GACTTTGCCA AGAAGCAAGG CTGGCAGGTC GAGGCGGTAC TCAACAACGA CATGATAGGC
AACATCGAGG GGATTAACGG CGTGGTGAGC AACCACACGG TGCGGGTGTT CTCCGAGGGC
GTGCGTATTG CAGAAACCGA GGCAGAAGCC AAGGAGCGTT ACTTCAGCGG CGGCGAGAAC
GACTCCGCCT CGCGTAACCT TGCCCGGCAT ATCAAGCAGC TGGCCGATCA GTACATGACT
AACCTGGATG TGCAGCTCAT CTATCGACTC GATCGCTTCG GTCGCGGCGG CCATCACCTG
CCCTTCAATA AGGCGGGATT CCCCGCGGTG CGCGTGATGG AAACCAACGA GAACTACAAC
CGCCAGCATC AGGACATTCG CACGGAGAAC GGTATTGCCT ATGGCGACGT GATTGAGGGG
GTAGATGAAG CCTTCGCCGC CAAGCTTACC GCCCTCAACG CCATCAGCCT GGCGTCTATG
GCCTGGGCAC CATCGCCGCC AACACAGGTG AGCATCTCGG GACAGGTCTC GGCCGATACC
CAGCTCAGCT GGCAGGCGGA TGCCACCGCC GAAGTCGCCG GTTACCGTAT CTATTGGCGC
AAGACCACAG AGGCAGAGTG GAGTCATAGC CGTTATGTGG GCAAGGTAAA CAGCTTCACC
CTGAGCAATA TGGTGATCGA CAACTACCTG TACGGCGTTG CCGCCGTGGG CTTTAACGGT
AACACCAGCC CTGTGGTGTT CCCCGGCGCG GCAGGCGCCT TCTTCCGCCC ACCAAGCGAT
GCAGATTCAA ACGCGGCGAA ATCGCACTAA
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| Protein sequence | MTIKASIGKT LVFTAICAGT AHAAPPATPL HHAGSSHTLL SQNALSQSAL NQSELNQSAL
GQSPYAAPSQ EDLRLYEIAG APQPARILQD IQTLVNFGTR HTLSSQTDKD RGIGAARNWI
KAEFERISAA CDHCLEVIEV GDTVSGKRIP EPTRVVNIIA IQRGTLDPNR VVMMSGDIDS
RVSDVMDASS FSPGANDNAS GVAGAMEAAR VLSQYQFGGT IVYAALSGEE QGLYGGAGLA
DFAKKQGWQV EAVLNNDMIG NIEGINGVVS NHTVRVFSEG VRIAETEAEA KERYFSGGEN
DSASRNLARH IKQLADQYMT NLDVQLIYRL DRFGRGGHHL PFNKAGFPAV RVMETNENYN
RQHQDIRTEN GIAYGDVIEG VDEAFAAKLT ALNAISLASM AWAPSPPTQV SISGQVSADT
QLSWQADATA EVAGYRIYWR KTTEAEWSHS RYVGKVNSFT LSNMVIDNYL YGVAAVGFNG
NTSPVVFPGA AGAFFRPPSD ADSNAAKSH
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