Gene Shew_1867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1867 
Symbol 
ID4924291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2145224 
End bp2145616 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content53% 
IMG OID640163435 
Producthypothetical protein 
Protein accessionYP_001093992 
Protein GI127512795 
COG category[S] Function unknown 
COG ID[COG3603] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000167229 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCGAA TGACGTTAGC GGTACATCCT CAGCTATACA GTATTCACAG CTTCAGCCCA 
GACAGTGAGT TAGTGCCCGA GGTGTTTCGT CAGCCCATGT TTTTCATCGG CAAGACCAAA
GATGAACTCT CTGTGGTGGT TCCCGCCGAG CTGCAACTCG ACAGCCTCGA AGAGGAGAGC
GACTGGCGCT GCCTCGAGGT GGTCGGTCCG CTGGGTTTCT CCATGACGGG GATCCTCGCC
AGCGTCTCAG GCACCTTGGC AGAAGCCAAG ATCAGCATCT TTGCCATCTC TACCTTCGAT
ACCGATTATA TTCTGGTGAA GAAGGACAAG CTGCAACAGG CGATACAGGC GCTGAAGAAG
ACCAACTATC AGATCATTCA TTACCAGGCC TAA
 
Protein sequence
MARMTLAVHP QLYSIHSFSP DSELVPEVFR QPMFFIGKTK DELSVVVPAE LQLDSLEEES 
DWRCLEVVGP LGFSMTGILA SVSGTLAEAK ISIFAISTFD TDYILVKKDK LQQAIQALKK
TNYQIIHYQA