| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1866 |
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| Symbol | |
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| ID | 4924289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2144935 |
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| End bp | 2145192 |
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| Gene Length | 258 bp |
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| Protein Length | 85 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163434 |
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| Product | phosphotransferase system, phosphocarrier protein HPr |
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| Protein accession | YP_001093991 |
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| Protein GI | 127512794 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000158092 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTACCAAA AAACAGTCAC CATCATGGCC GAGCACGGCA TTCATACCCG GCCAGCCGCC
CTGCTCGTTA AGGCAGCTAA GGCCTATGAT TGTGACATCA TAGTGGAATG CCAGGGCAAG
CAGGCCAGCG CCAAAAGCCT GTTTAAGCTG CAGACCCTGG GCCTTTACAA GGGCGTGGAG
GTCAAGGTCA GCGCCGATGG CGAGCAGGCA AAGCCAGCGG TTGATACCGT TGCCGAGCTG
CTCATCACCT TAAGTTAA
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| Protein sequence | MYQKTVTIMA EHGIHTRPAA LLVKAAKAYD CDIIVECQGK QASAKSLFKL QTLGLYKGVE
VKVSADGEQA KPAVDTVAEL LITLS
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