| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1865 |
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| Symbol | |
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| ID | 4924339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2143217 |
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| End bp | 2144923 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163433 |
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| Product | phosphoenolpyruvate-protein phosphotransferase |
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| Protein accession | YP_001093990 |
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| Protein GI | 127512793 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000265119 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGATGA GAGGCATAGC GGTATCGGCG GGCATCGCCT TCGGGCAGGC CAAGGTGCTT
CGCACCTATG AAAGCAAACT CGACTATCAC CTCTTGCCTC CCTCCCAGCT CGCCCGCGAG
CAGCAAAGAC TCAATCGCGC CCTCAAGACC CTCATCAAAC AAAGCCAGGC CTGCGCCGCC
AAGCTAGATC CCGAATCGGA CAACTACCAG CTGATCGAAG CCGATCTCCT GCTGTTAGAG
GATGAAGAGT TACTGGCCGA GCTCAGCGAC ACCATAGGCA AGCGCCAGTT TTCAGCGGCC
CTGGCGGTGG AGCACAGCTT CGCCAAACAG GCCCAGGCGA TGCAAGAGGC AGACTCCCCC
TATCTCGCAA GGCGCGCCGA AGATGTGCTG AGTCTGGGTC AGCGCCTGAT CCGCACCCTG
CTTACCGGAC ACTGCGACAA CCTCAGCCGC CTGCCGGAAA ATGCTATCGT CCTAGCTAAA
GATATTACCC CGGCCGAGTT CGCCACCCTG CCACTTGAGC GCGTCAGCGC CTTGGTACTG
CAGACCGGCG GCGTCACCAG CCATACCGCG ATCCTGGCCC GCAGCGCGGG CATTCCCACT
CTGATGAGCT GCCCCTGGCA GACACTAGAG GTGACGGATG GCATGGTGTT GGCGGTAGAT
GCCATCAATG GCGAGCTCTA TCTTGAGCCC GACGAGACGC AGATAGATGA TCTTAACGCC
CAGAAACAGC AGGCGGACGA GCGCAAGTCG GCGCTACTGG CCTTAAAAGG CACAGTCACC
CAGACTAAGG ATGGCCGCTC CATTCCCCTG CTGGCAAATG TCGGCTGTAT CAGCGAAATC
AATCACCTGG CCGATGTGGG CGCCGAGGGG GTTGGCCTGT TTCGCACCGA ATTTCTGTTT
ATGAACAACC ACGAGCTGCC GGACGAGAAC CGCCAGTATC AGCTCTACTG TGACGCTTTG
CAGCTGCTCG ACGGCAAGCC GCTCACCATT CGCAGCATGG ATCTGGGCGC CGACAAGGAG
GTGCCAACCC TCGCCATGGA CAGCGAGGAG AATCCTGCAC TGGGCCTCAG AGGCGTCAGG
TACACACTCG CCCATCCTAA GCTGTTTAGT GCCCAGCTCA AGGCGATCCT CAGGGCCGCC
AACCATGGTC CTATCCGCCT CATGTTTCCC ATGGTCAATC AGGTGGAGGA ACTCGAAGCG
GTTCTTGCGC TGCTGGAGCT GTGCAAACAG GAGCTTGTGG AGGCGGAAAA AGGCTTTGGT
GAACTCGAGC TTGGCATAGT GGTGGAAACC CCGGCGGCGG TGTTTAATCT CGCCTCCATG
CTCCCCCTGC TGGATTTTGT CAGCATAGGC ACCAACGATC TCACCCAATA TACTATGGCC
GCCGACCGCG CCAATCCACT GCTGATCGAC CAATATCCGG TGCTCTCGCC TGTGATCATC
CGCCTGATCG CCCAGATTAT CGAACAAGCC AAGGCTGCCA AGGTGCGAGT CTCCATGTGT
GGCGAGCTGG CCAGTAACCC CAGCGCCACA GCGCTCCTAA TAGGCCTTGG GCTCGAGGAG
TTTAGCGTCA ACCTGGCCTC ACTACTCGAG GTTAAACAGG CCCTCAGTCG TTGGTCTTAC
CCAGATTGTG TCGAACTTGC GCACAAGGCC TTGCAAATTT CGCGCATCGA TGCGTTAAAT
CAATTATTAA CACACTGTCA CTCTTGA
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| Protein sequence | MTMRGIAVSA GIAFGQAKVL RTYESKLDYH LLPPSQLARE QQRLNRALKT LIKQSQACAA
KLDPESDNYQ LIEADLLLLE DEELLAELSD TIGKRQFSAA LAVEHSFAKQ AQAMQEADSP
YLARRAEDVL SLGQRLIRTL LTGHCDNLSR LPENAIVLAK DITPAEFATL PLERVSALVL
QTGGVTSHTA ILARSAGIPT LMSCPWQTLE VTDGMVLAVD AINGELYLEP DETQIDDLNA
QKQQADERKS ALLALKGTVT QTKDGRSIPL LANVGCISEI NHLADVGAEG VGLFRTEFLF
MNNHELPDEN RQYQLYCDAL QLLDGKPLTI RSMDLGADKE VPTLAMDSEE NPALGLRGVR
YTLAHPKLFS AQLKAILRAA NHGPIRLMFP MVNQVEELEA VLALLELCKQ ELVEAEKGFG
ELELGIVVET PAAVFNLASM LPLLDFVSIG TNDLTQYTMA ADRANPLLID QYPVLSPVII
RLIAQIIEQA KAAKVRVSMC GELASNPSAT ALLIGLGLEE FSVNLASLLE VKQALSRWSY
PDCVELAHKA LQISRIDALN QLLTHCHS
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