Gene Shew_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1863 
Symbol 
ID4924317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2142010 
End bp2142354 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content54% 
IMG OID640163431 
Productarsenate reductase and related 
Protein accessionYP_001093988 
Protein GI127512791 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1393] Arsenate reductase and related proteins, glutaredoxin family 
TIGRFAM ID[TIGR01617] transcriptional regulator, Spx/MgsR family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000185327 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACCCTAT ACGGTATTAA GAATTGCGAC ACAGTTAAGA AAGCCCTCAA ATGGCTCGAT 
GCCAACCAAC AAGCCGTCAC CTTTCACGAC TTTCGCGTCG ACGGTCTCAC CGAAGCGCAG
CTTAACACCT GGGTCGAACA GATTGGCTGG GAGAGCCTGT TTAACAAACG CAGCACCAGT
TTCCGTAACC TGAGCGACGC CGAGAAGGCC GACATAGACC AAGCCAAAGC CGTTGCCCTC
ATGCTCACCT ATCCCACCCT GATCAAGCGC CCGGTGCTGG AACATCAGGG AGAGCTCAGC
GTCGGTTTCA AGCCGGCACA ATATGAGGAG ATCTTCAACC GATGA
 
Protein sequence
MTLYGIKNCD TVKKALKWLD ANQQAVTFHD FRVDGLTEAQ LNTWVEQIGW ESLFNKRSTS 
FRNLSDAEKA DIDQAKAVAL MLTYPTLIKR PVLEHQGELS VGFKPAQYEE IFNR