Gene Shew_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1859 
Symbol 
ID4924398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2138546 
End bp2139157 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content57% 
IMG OID640163427 
Productcarbonate dehydratase 
Protein accessionYP_001093984 
Protein GI127512787 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0117896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000151742 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAACTAC TTAAACCTTT GTTCGACAAC AACCGCCGCT GGGCCAACCG CATCCTGGAA 
GAGAATCCTA AGTTCTTTGA ACAACTGGCC CAACAGCAAA ATCCCGAGTA TCTGTGGATT
GGCTGCTCGG ACAGTCGGGT ACCGTCGAAC CAGATCATCG ACCTCATGCC GGGCGAGGTG
TTCGTTCATA GAAACATCGC CAACATGGTG ATCCACACGG ATCTCAACTG CCTCTCGGTG
CTGCAATATG CGGTGGAGGT GCTCCAGGTT AAACATATCA TGGTGGTCGG CCACTACGGC
TGCGGCGGCA TCAAGGCCTC CATGGGCAAT GATCGCCTCG GACTCATTGA CAACTGGCTG
GGCCATATCC GCGATATCCA TCGCCTGCAC GCCAAGGAGC TGGCGGAGCT TGATGAGAAG
ACCCGCTTCG ATCGCCTGTG TGAGCTCAAC GTCATCGAGC AGGTCGGCAA TGTCGCCAGC
ACCACCATAG TGCAAGACGC CTGGGAGCGC GGTCAGAAGG TGGCGGTACA CGGCTGGATC
TACAGCGTCG AAAACGGCCT GCTGTCGGAT CTCGACGTCA CGGTAGACAA CGAAACCTTT
GCCCGCCGTT AG
 
Protein sequence
MKLLKPLFDN NRRWANRILE ENPKFFEQLA QQQNPEYLWI GCSDSRVPSN QIIDLMPGEV 
FVHRNIANMV IHTDLNCLSV LQYAVEVLQV KHIMVVGHYG CGGIKASMGN DRLGLIDNWL
GHIRDIHRLH AKELAELDEK TRFDRLCELN VIEQVGNVAS TTIVQDAWER GQKVAVHGWI
YSVENGLLSD LDVTVDNETF ARR