Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1859 |
Symbol | |
ID | 4924398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2138546 |
End bp | 2139157 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640163427 |
Product | carbonate dehydratase |
Protein accession | YP_001093984 |
Protein GI | 127512787 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0288] Carbonic anhydrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0117896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000151742 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAACTAC TTAAACCTTT GTTCGACAAC AACCGCCGCT GGGCCAACCG CATCCTGGAA GAGAATCCTA AGTTCTTTGA ACAACTGGCC CAACAGCAAA ATCCCGAGTA TCTGTGGATT GGCTGCTCGG ACAGTCGGGT ACCGTCGAAC CAGATCATCG ACCTCATGCC GGGCGAGGTG TTCGTTCATA GAAACATCGC CAACATGGTG ATCCACACGG ATCTCAACTG CCTCTCGGTG CTGCAATATG CGGTGGAGGT GCTCCAGGTT AAACATATCA TGGTGGTCGG CCACTACGGC TGCGGCGGCA TCAAGGCCTC CATGGGCAAT GATCGCCTCG GACTCATTGA CAACTGGCTG GGCCATATCC GCGATATCCA TCGCCTGCAC GCCAAGGAGC TGGCGGAGCT TGATGAGAAG ACCCGCTTCG ATCGCCTGTG TGAGCTCAAC GTCATCGAGC AGGTCGGCAA TGTCGCCAGC ACCACCATAG TGCAAGACGC CTGGGAGCGC GGTCAGAAGG TGGCGGTACA CGGCTGGATC TACAGCGTCG AAAACGGCCT GCTGTCGGAT CTCGACGTCA CGGTAGACAA CGAAACCTTT GCCCGCCGTT AG
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Protein sequence | MKLLKPLFDN NRRWANRILE ENPKFFEQLA QQQNPEYLWI GCSDSRVPSN QIIDLMPGEV FVHRNIANMV IHTDLNCLSV LQYAVEVLQV KHIMVVGHYG CGGIKASMGN DRLGLIDNWL GHIRDIHRLH AKELAELDEK TRFDRLCELN VIEQVGNVAS TTIVQDAWER GQKVAVHGWI YSVENGLLSD LDVTVDNETF ARR
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