| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1858 |
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| Symbol | |
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| ID | 4924385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2137104 |
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| End bp | 2138291 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163426 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_001093983 |
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| Protein GI | 127512786 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0010747 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000210288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCCTGGTT TTGAATTATT TGGTCCTGAA GAGAAGCAGG AAGTTGCTGA CGTAATGGAA
AACGGTTTTA CCTTCCGTTA CAACTTTGAT CACATGCGTA ACGACCGCTG GAAGACGCGT
GAGATGGAGC AACTGCTCTG CGAGAAGATG AATGTCAAAC ACGCCCACCT GCTCTCGAGC
GGTACCGCTG CCCTGCAGAC GGCACTGGCC GCCGCAGGTA TAGGCGCAGG CGATGAAGTG
ATCGTTCCTC CCTTTACCTT CGTGGCCTCT GTCGAAGCCG TATTCATGGC CGGCGCCGTT
CCCGTATTTG CCGAGATCGA CGAGACCCTG TGTCTGTCAC CAGAAGGCAT TGAAGCCGCT
ATTACCCCTC GTACCAAGGC AGTAAACCTG GTACACATGT GTGGCTCTAT GGCCAAGATG
GATGAGATCA AGGCTATCTG TGAGAAGCAC AACCTGGTGC TGCTGGAAGA TGCCTGTCAG
GCCATCGGCG GTAGCTACAA GGGTCAGGCA CTGGGCACTA TCGGTGACGT AGGCTGCTAC
TCTTTCGATT CTGTTAAGAC CATCACCTGT GGTGAAGGCG GCGCGGTGAT CACCAATGAT
GAGACCATCT ATAACCACGC CCATATGTTC TCTGACCATG GCCACGACCA TGTCGGTAAC
GATCGCGGCG CAGAGAGTCA CCCTATCATG GGTCTGAACT TCCGCATCTC TGAGATGAAC
TCGGCGCTTG GCCTTGCGCA GCTGCGTAAG CTAGATACCA TCATCGACAT CCAGCGCAAG
AACAAGAAGC TGCTTAAAGA TGCCATGGCC GAGCTGCCAG AGGTGAGCTT CCGCGAGATC
CCGGATCCAG AAGGTGACTC AGCAGGCTTC CTAAGCTTCA TGCTGCCTAC CGAGGCCCGC
ACCCAAGAGA TCAGCAAAAA ACTGGCCGAA AACGGCGTTG ACGGCTGCTT CTACTGGTAT
GTGAACAACT GGCACTACCT GTCAAACTGG AAACACATTC AAGAGCTTAA ATCACCAGCC
GCTCTGCCGA TCACATTAAT TGCCGACAAA CCTGACTATA CTCAGGTGTC TGTGCCTAAG
TCTGATGCCA TCATGAGCCG CACCATTTCG ATGTTGATCA AGCTCTCTTG GACTGAAGAA
GAGATCGCCC AGCGCATCGA GAACATCAAG CGTGCCTTCG CCGCTTAA
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| Protein sequence | MPGFELFGPE EKQEVADVME NGFTFRYNFD HMRNDRWKTR EMEQLLCEKM NVKHAHLLSS
GTAALQTALA AAGIGAGDEV IVPPFTFVAS VEAVFMAGAV PVFAEIDETL CLSPEGIEAA
ITPRTKAVNL VHMCGSMAKM DEIKAICEKH NLVLLEDACQ AIGGSYKGQA LGTIGDVGCY
SFDSVKTITC GEGGAVITND ETIYNHAHMF SDHGHDHVGN DRGAESHPIM GLNFRISEMN
SALGLAQLRK LDTIIDIQRK NKKLLKDAMA ELPEVSFREI PDPEGDSAGF LSFMLPTEAR
TQEISKKLAE NGVDGCFYWY VNNWHYLSNW KHIQELKSPA ALPITLIADK PDYTQVSVPK
SDAIMSRTIS MLIKLSWTEE EIAQRIENIK RAFAA
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