| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1845 |
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| Symbol | |
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| ID | 4924311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2121305 |
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| End bp | 2121949 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163413 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001093970 |
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| Protein GI | 127512773 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1279] Lysine efflux permease |
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| TIGRFAM ID | [TIGR00948] L-lysine exporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.142006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0992171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTATTT TGGAGTTTCT CGTGCAAGCA TTCATTCAGG GGATAGGTGT TGGTGGCAGC
CTGATCATCG CCGTTGGGGC GCAAAACGCC TTCGTATTAA AGCAAGGCTT AAAGCGCGCC
CATTCCTTAC CTATCGCTGC CCTGTGTTCT TTTATCGATG CCGTGATGAT CACCGCAGGC
GTGGCGGGCC TCGGCCATCT GATCCTGGCT TTTCCCTTAA TCAAGGATAT CGCCAGCCTC
GGGGGTGCAG CCTTCTTGCT CGTCTATGGT GCTCAGGCTC TGCGCGCGTC CTTTAATGCT
CAGGGACTGG ATACCGACTC GACCCAGGGG GCGGACACTC TGCGAGCGGC GCTGCTCACC
ACTCTGGGGA TTAGCCTGCT TAACCCCCAT CTGTATCTCG ACACCGTTGT CTTGCTGGGT
AGCATCAGCA CTCAGTTTGA GCAGCAAGAC AGGCATATGT TTGGCGCCGG CGCCGTGCTC
GCCTCTTTCG TGTGGTTCTT CGCCTTGAGC CTGGGTGCCA GGTACTTAAG TCCGCTGTTT
AAAAAACCAA AGGCCTGGTG CTACTTAGAC AGATTCATTT TTGTGACTAT GTGGAGTATC
GCGGCGGCGC TGCTTTGGCC CTATGTTAAG GCCATGATGG GCTAA
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| Protein sequence | MVILEFLVQA FIQGIGVGGS LIIAVGAQNA FVLKQGLKRA HSLPIAALCS FIDAVMITAG
VAGLGHLILA FPLIKDIASL GGAAFLLVYG AQALRASFNA QGLDTDSTQG ADTLRAALLT
TLGISLLNPH LYLDTVVLLG SISTQFEQQD RHMFGAGAVL ASFVWFFALS LGARYLSPLF
KKPKAWCYLD RFIFVTMWSI AAALLWPYVK AMMG
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