Gene Shew_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1840 
Symbol 
ID4924318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2116679 
End bp2117041 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content54% 
IMG OID640163408 
Productarsenate reductase 
Protein accessionYP_001093965 
Protein GI127512768 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1393] Arsenate reductase and related proteins, glutaredoxin family 
TIGRFAM ID[TIGR00014] arsenate reductase (glutaredoxin) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.455524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0890605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGAA CTGCCATGAC GCAAGTAAGC ATAATTCATA ACCCTCGTTG CTCTAAAAGC 
CGCCAAACCC TGGCGCTGCT GGAAGAGAAA GCCTGCGATA TCCAAGTGAT CGAATACCTC
AAGACGCCAC TGACCAAGGT GGAGATCCGC AGCATCTTAG ATAAGCTTGG CCTAGCGCCG
CGTGAGCTGA TGCGCACCAA GGAAGAGGAA TACAAGGCGT TGAACCTGGC CGACGTCACC
GACGACGAGG CGCTTATCCA GGCCATGGTA GACACCCCTA AGCTGATCGA GCGTCCTATC
GTGCTGGCTA ACGGTAAGGC GGCAATTGGT CGCCCTCCAG AAAACGTACT GGCCATTCTG
TAA
 
Protein sequence
MDRTAMTQVS IIHNPRCSKS RQTLALLEEK ACDIQVIEYL KTPLTKVEIR SILDKLGLAP 
RELMRTKEEE YKALNLADVT DDEALIQAMV DTPKLIERPI VLANGKAAIG RPPENVLAIL