| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1833 |
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| Symbol | |
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| ID | 4921969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2109122 |
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| End bp | 2111056 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163401 |
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| Product | putative serine protein kinase, PrkA |
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| Protein accession | YP_001093958 |
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| Protein GI | 127512761 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2766] Putative Ser protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.593259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATTT TCGAGCATTA TCAACAGCGC TATGAAAAAA AATTAGACGA AGAGTATTCA
CTGCAAGAGT TTCTGGCTAT CTGTAAAGAG GACAGGATCG CCTACGCATC GGCGGCCGAG
CGACTGCTTA CGGCTATCGG TAAGCCGGAG GTCATAGACA CCTCTAAGGA TCCGATCCTT
AGCCGCATCT TCTCCAACAG GCTTATCTCT CGCTATCCCG CCTTTAAAGA TTTTTACGGC
ATGGAAGACT CTATCGAGCA GATCGTCGCC TACCTCAAAC ATTCGGCCCA AGGGCTAGAA
GAATCGAAAC AGATCCTCTA TCTGCTAGGC CCTGTGGGGG GCGGTAAGTC CTCCTTGGCC
GAGAAGCTCA AATCATTGAT GCAGAGAGTG CCCATCTATG TGCTGAGCGC CAATGGCCAA
CGCAGCCCAG TCAACGACCA TCCCTTCTGT CTGTTCAATC CGGAGGAAGA TGGGGAGCTG
CTTAAGAACG AATACAACAT ACCCGAGCGC TACCTAAAGA CCATAATGTC ACCCTGGGCG
GTGAAGCGCC TGCATGAGTT TGGCGGCGAT ATCTCCCAGT TCAAGGTGGT CAAGGTCTTC
CCCGCCATCC TAGATCAGAT TGGGATAGCT AAGACAGAGC CAGGCGATGA GAACAATCAG
GATATCTCAT CGCTCGTCGG TAAGGTGGAT ATTCGTCAGC TGGAGCACTA CGCCCAGCAT
GATGCCGATG CCTACTCCTA CTCGGGCGCC TTGTGCCGTG CCAACCAAGG CCTCATGGAG
TTCGTCGAGA TGTTTAAGGC GCCAATCAAG GTGCTGCACC CCTTGCTGAC CGCCACCCAG
GAGGGTAACT ACAACGGCAC AGAAGGCCTA TCGGCCCTGC CCTTCAACGG CATCATTCTG
GCGCACTCCA ACGAGTCGGA ATGGACCAGC TTTAGAAACA ACAAGACCAA CGAGGCCTTC
TTAGATAGGG TCTACATAGT CAAGGTGCCT TATTGCCTCA GGGTGTCAGA AGAGATCCAG
ATCTACGAGA AACTGCTCAC CAACTCTGAG TTGGCTCAGG CGCCATGCGC GCCTTATACC
CTAGAGACGC TGGCCCAGTT TAGCGTACTG TCGCGCATCA AGGCGCCGGA AAACTCTTCC
ATCTACTCTA AGATGCGGGT CTATGATGGC GAGAGCCTGA AAGATACCGA TCCTAAGGCC
AAGTCTTATC AGGAGTATCG CGACTATGCC GGTGTGGATG AAGGGATGCA GGGGCTCTCT
ACCCGCTTCG CCTTTAAGAT CCTCTCTAAG GTGTTTAACT TCGATCACAG CGAGATCGCC
GCCAACCCTG TGCACCTCTT CTATGTGCTG GAGCGCCAAA TCGAGCAGGA ACAGTTCCCC
GCCGAGACGG CCGAGCGCTA TATGGAGTTC CTAAAAGGCT ACCTCACCCC TAAATATATC
GAGTTCATCG GTAAAGAGAT CCAGACCGCC TACCTGGAAT CCTATTCGGA ATATGGCCAG
AACATCTTCG ATCGCTATGT CACCTACGCC GACTTCTGGA TCCAGGATCA GGAGTACCGG
GATCCTGAGA CAGGCCAGCT GTTCGATCGT GCCGCCCTCA ACGCCGAGCT TGAGAAGATA
GAGAAGCCTG CGGGGATCAG TAACCCGAAA GATTTCCGCA ATGAGATCGT CAACTTCGTA
CTGCGCGCCA GGGCCAACAA CGAAGGCTCT AACCCTCTGT GGACCAGCTA TGAGAAGCTG
CGTACCGTCA TCGAGAAAAA GATGTTCTCC AACACGGAAG ATCTGCTGCC GGTTATCTCA
TTCAATACCA AGACCTCGAC AGACGATCAG CGTAAGCACG ACGATTTCGT CAATCGCATG
ATGGAGAAAG GCTACACCAA GAAACAGGTC AGACTCTTGT CTGAGTGGTA TTTACGGGTT
CGTAAATCAT CTTGA
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| Protein sequence | MGIFEHYQQR YEKKLDEEYS LQEFLAICKE DRIAYASAAE RLLTAIGKPE VIDTSKDPIL
SRIFSNRLIS RYPAFKDFYG MEDSIEQIVA YLKHSAQGLE ESKQILYLLG PVGGGKSSLA
EKLKSLMQRV PIYVLSANGQ RSPVNDHPFC LFNPEEDGEL LKNEYNIPER YLKTIMSPWA
VKRLHEFGGD ISQFKVVKVF PAILDQIGIA KTEPGDENNQ DISSLVGKVD IRQLEHYAQH
DADAYSYSGA LCRANQGLME FVEMFKAPIK VLHPLLTATQ EGNYNGTEGL SALPFNGIIL
AHSNESEWTS FRNNKTNEAF LDRVYIVKVP YCLRVSEEIQ IYEKLLTNSE LAQAPCAPYT
LETLAQFSVL SRIKAPENSS IYSKMRVYDG ESLKDTDPKA KSYQEYRDYA GVDEGMQGLS
TRFAFKILSK VFNFDHSEIA ANPVHLFYVL ERQIEQEQFP AETAERYMEF LKGYLTPKYI
EFIGKEIQTA YLESYSEYGQ NIFDRYVTYA DFWIQDQEYR DPETGQLFDR AALNAELEKI
EKPAGISNPK DFRNEIVNFV LRARANNEGS NPLWTSYEKL RTVIEKKMFS NTEDLLPVIS
FNTKTSTDDQ RKHDDFVNRM MEKGYTKKQV RLLSEWYLRV RKSS
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