Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1826 |
Symbol | |
ID | 4924362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2101820 |
End bp | 2102377 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640163391 |
Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
Protein accession | YP_001093951 |
Protein GI | 127512754 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000440602 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTTA ATGTACCGAT AGCTCTCACA TTTTTTAGAT TAATATTACT ACCTGTTTTT GTAGTGCTTT TTTATGTGCC TTACACTTGG TCACCCTTTG CGGCTGCCTT CGTATTTTGG CTGGCGGCGG TAACTGACGC ATTAGATGGC TACGCGGCGC GAAAATTACA GCAATCGACC CGTTTCGGTG CATTCTTAGA TCCTGTCGCC GACAAGATCA TGGTGACCAC GGCGTTGGTG CTCTTGGTGG CCGAATATAA GAGTATCTGG CTGACCCTGC CGGCGCTGTT TATGATTGGC CGCGAGATAG TGATCTCAGC ACTGCGTGAA TGGATGGCCG AGATCGGTAA GCGCGGCGCG GTTGCCGTGT CCTGGATAGG CAAGTATAAG ACGGCGGCGC AGATGGTGGC CATCATAGGC CTTATCTGGA AGCCTAACGA GTTTCTAACT TACACGGCGA TGGCACTGTT TTACGTGGCG GCAATCCTTA CGTTTTGGTC CATGGTGAGC TACATTATGG CGGCCTGGGC GGATCTCACA GACGAATCGA ACAATTAA
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Protein sequence | MPFNVPIALT FFRLILLPVF VVLFYVPYTW SPFAAAFVFW LAAVTDALDG YAARKLQQST RFGAFLDPVA DKIMVTTALV LLVAEYKSIW LTLPALFMIG REIVISALRE WMAEIGKRGA VAVSWIGKYK TAAQMVAIIG LIWKPNEFLT YTAMALFYVA AILTFWSMVS YIMAAWADLT DESNN
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