| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1822 |
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| Symbol | |
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| ID | 4924367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2095181 |
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| End bp | 2097769 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163387 |
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| Product | aconitate hydratase |
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| Protein accession | YP_001093947 |
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| Protein GI | 162139868 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.490581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCTT TACATCGTAA ACCGCTTCCC GGCAGCGCGC TCGATTACTT TGATACCCGC
GCCGCCGTCG AGGCCTTAAG CGCAGGCGCC TATGACAAAC TGCCCTATAC CGCTAAGGTG
CTGGCAGAAA ACCTGGTAAG ACGCTGCGAG CCCGAACTGC TTAACGACGC CCTGAGTCAG
CTCATCGATC GTAAGCGCGA TCTCGACTTC CCCTGGTATC CGGCGCGTGT CGTGTGCCAC
GATATTCTCG GCCAGACGGC ACTGGTTGAT TTGGCTGGTC TGCGTGATGC CATCGCCGAG
AAGGGCGGGG ATCCTTCAAA GGTTAACCCT GTGGTGCCGA CTCAGCTGAT CGTGGATCAC
TCGCTGGCGG TTGAACATGC GGGCTTTGAA AAAGATGCCT TCGAGAAGAA CCGCGCGATT
GAAGATCGCC GCAACGAAGA CAGATTCCAT TTCATCAACT GGACCAAGAC GGCCTTTAAG
AATGTCGATG TGATCCAGCC CGGCAACGGC ATTATGCACC AGATCAACCT GGAGAAGATG
TCGCCGGTGA TCCAGGCCCG TGATGGTGTG GCCTTCCCCG ATACGCTTGT GGGTACCGAC
AGCCATACGC CTCACGTGGA TGCGTTGGGC GTTATCGCCA TAGGCGTGGG CGGTCTCGAA
GCCGAGAACG TCATGCTGGG TCGCCCATCC TACATGCGTC TGCCGGACAT CGTCGGTGTT
GAGCTGACGG GTAAGCGTCA GAGCGGCATC ACGGCCACGG ACATCGTGCT GGCTCTGACC
GAGTTTTTAC GTCAAGAGAA AGTGGTTTCA GCTTATCTTG AGTTCTTCGG TGAAGGCGCC
GCGGATCTCA CCCTTGGGGA TCGCGCCACC ATCTCCAACA TGACCCCTGA ATTTGGCGCC
TCGGCGGGTA TGTTCTATAT CGACCAGCAA ACCATCGACT ATCTCACCAT CACGGGTCGT
GATAGCGAGC AGGTCAAGCT GGTGGAAAAC TATGCCAAGA CCACGGGTCT GTGGGCCGAC
AGCCTGAAAG ATGCTGAGTA TGAAAGGGTA CTGACCTTCG ATCTTTCGAG CGTAGTGCGT
AATATCGCCG GTCCTTCGAA TCCACACCGC CGAGTGGCGA CCAGCGAGCT GGCCAGTCAA
GGCATTGCCG GCGTGGTTGA GCAGGATGAC AAGCTGATGC CTGATGGCGC GGTGATCATC
GCCGCCATCA CTAGCTGTAC CAACACCAGC AACCCAAGAA ACGTAATAGC AGCGGGCTTG
CTCGCCAAGA AGGCCAACGA GCTTGGCTTA GTGCGTAAAC CCTGGGTGAA AACCTCTTTC
GCCCCAGGCT CTAAGGTAGC CGAGCTTTAC CTAAAAGATG CGGGGCTTCT GCCTGAGCTT
GAGCAACTGG GCTTTGGCAT AGTAGGTTTT GCCTGCACCA CCTGTAACGG CATGAGCGGG
GCACTTGACC CTGTGATCCA GCAAGAGGTG ATCGACAGAG ACTTGTACGC TACCGCCGTA
TTGTCGGGCA ACCGTAATTT CGACGGTCGT ATCCACCCCT ATGCCAAGCA GGCGTTTCTG
GCATCGCCGC CATTGGTGGT GGCCTATGCC ATCGCGGGTA CCATCAGATT CGATATCGAG
AAAGATATCT TAGGTCATGA TGACAAGGGC GAGCCGATTC GCCTCAAGGA TATCTGGCCG
AGCGATGAAG AGATCGATGC CATCGTCAAG GCGAGCGTGA AGCCGCAGCA GTTTAGGGAT
ATCTATACCC CTATGTTCGA CCTCGCGGTT GACTATGGTG AGGATGTCAA TCCGCTGTAT
GACTGGCGTC CACAGAGTAC CTATATTCGT CGTCCTCCCT ACTGGGAAGG CGCGCTTGCC
GGTGAGCGTA CCCTGAAGGG CATGCGCCCG CTGGCGGTAC TTGGGGATAA CATCACCACA
GATCACCTAT CGCCTTCTAA CGCCATCTTG GCCAGCAGCG CCGCCGGCGA ATACCTGGCG
AAGATGGGCC TGCCCGAGGT GGACTTTAAC TCTTACGCGA CTCATAGGGG CGACCACCTG
ACGGCCCAGC GTGCGACCTT TGCCAACCCT AAGCTGATCA ACGAGATGGC GCTGGTGGAT
GGTGAAGTCA AGCAAGGCTC ACTGACTCGC CTCGAGCCAG AAGGTGAGGT GATGCGTATG
TGGGAGGCGA TCGAGACCTA TATGGATCGC AAGCAGCCAC TGATCATCAT CGCCGGTGCC
GACTATGGTC AGGGTTCGTC CCGAGACTGG GCGGCCAAAG GGGTGCGACT GGCAGGGGTT
GAGGCGATTG TCGCCGAAGG CTTCGAGCGT ATTCACCGTA CCAACCTGGT CGGTATGGGT
GTACTACCGC TGGAGTTCAA GGCCGGTGAA AACCGCCACA CCTATGGTAT CGATGGCAGC
GAGACCTTCG ATGTGATCGG TGAGCCCACG CCGAGAGCGG ATCTGACTGT AGTGATCACC
CGTCAAAATG GCGAGCGTGT CGAGGTGCCG GTGATCTGTC GTCTGGATAC CGCCGATGAG
GTACTTGTCT ATCAGGCAGG CGGTGTGTTG CAGCGCTTCG CGCAGGACTT CCTCGAAGCG
AACGCCTAA
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| Protein sequence | MNSLHRKPLP GSALDYFDTR AAVEALSAGA YDKLPYTAKV LAENLVRRCE PELLNDALSQ
LIDRKRDLDF PWYPARVVCH DILGQTALVD LAGLRDAIAE KGGDPSKVNP VVPTQLIVDH
SLAVEHAGFE KDAFEKNRAI EDRRNEDRFH FINWTKTAFK NVDVIQPGNG IMHQINLEKM
SPVIQARDGV AFPDTLVGTD SHTPHVDALG VIAIGVGGLE AENVMLGRPS YMRLPDIVGV
ELTGKRQSGI TATDIVLALT EFLRQEKVVS AYLEFFGEGA ADLTLGDRAT ISNMTPEFGA
SAGMFYIDQQ TIDYLTITGR DSEQVKLVEN YAKTTGLWAD SLKDAEYERV LTFDLSSVVR
NIAGPSNPHR RVATSELASQ GIAGVVEQDD KLMPDGAVII AAITSCTNTS NPRNVIAAGL
LAKKANELGL VRKPWVKTSF APGSKVAELY LKDAGLLPEL EQLGFGIVGF ACTTCNGMSG
ALDPVIQQEV IDRDLYATAV LSGNRNFDGR IHPYAKQAFL ASPPLVVAYA IAGTIRFDIE
KDILGHDDKG EPIRLKDIWP SDEEIDAIVK ASVKPQQFRD IYTPMFDLAV DYGEDVNPLY
DWRPQSTYIR RPPYWEGALA GERTLKGMRP LAVLGDNITT DHLSPSNAIL ASSAAGEYLA
KMGLPEVDFN SYATHRGDHL TAQRATFANP KLINEMALVD GEVKQGSLTR LEPEGEVMRM
WEAIETYMDR KQPLIIIAGA DYGQGSSRDW AAKGVRLAGV EAIVAEGFER IHRTNLVGMG
VLPLEFKAGE NRHTYGIDGS ETFDVIGEPT PRADLTVVIT RQNGERVEVP VICRLDTADE
VLVYQAGGVL QRFAQDFLEA NA
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