| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1821 |
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| Symbol | |
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| ID | 4924370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2093970 |
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| End bp | 2095094 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163386 |
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| Product | 2-methylcitrate synthase/citrate synthase II |
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| Protein accession | YP_001093946 |
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| Protein GI | 127512749 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGATA AAAAATTAGG CGGCGCCGGA CTACGTGGAC AGAGTGCTGG CGAAACGGCG
TTATGTACAG TGGGCAAATC AGGCTCAGGT TTAACCTATT GTGGCTATGA TGTGTCGGAT
CTTGCGGATA ATGCCACCTT CGAAGAGGTT GCTTACCTGC TATTTAATGG CGAGTTGCCC
AATGCGGCGC AGCTGGATGC CTACAAGAGC GAGCTGATGT CGATGCGCGA CCTGCCGCAG
ACTCTCAAAG AGGTGCTGCA GCGCATTCCT GCCGATGCCC ATCCTATGGA TGTGATGCGT
ACCGGTTGCT CTTTCCTGGG TAACCTAGAG CCAGAGACAG ATTTCAGCCA GCAAAACAAG
GCGGCTAACC GTCTGCTAGC GGCGTTTCCT GCCATCATGT GTTACTGGTA CCGTTTCAGC
CATGACGGCG TCGAGATTGA TTGTGTGACC GACGAAGACT CGCTAGGCGG TCACTTCCTT
AAGCTGCTCA ACGGCAAGAC GCCATCGGAT CAACATCGCC GCGTGATGGA TGTGTCGTTG
ATCCTCTATG CAGAGCACGA ATTCAACGCC TCGACTTTCA CTGCGCGCGT CTGTGCCTCG
ACCCTGTCTG ACATGTTCTC TTGTATCACA GGTGCTATCG GTTCGCTGCG CGGCCCGCTG
CACGGCGGCG CCAACGAGGC GGCGATGGAG ATGATCCAAA AGTTTAGCTC GCCAGAAGAT
GCCAAGGTGC AGATGGCTGG CATGCTGGAG CGTAAAGAGA AGATCATGGG CTTTGGTCAC
GCCATCTATC GTGAGTCGGA TCCGCGCAAC GTGATCATCA AGGCCTGGTC TGAGAAGCTG
GCGAAAGAGT TTGGCGATAC CTCACTCTAC GATATCTCTG TGGCTTGTGA AGAGTATATG
TGGGACACCA AGAAGCTGTT CTGTAACGCC GACTTCTTCC ATGCGTCAGC CTATCACTTC
ATGGGTATCC CAACTAAGTT GTTTACCCCT ATCTTCGTCT GCTCGCGCCT GACCGGCTGG
GCGGCTCATG TGATGGAGCA GCGCGCCAAC AACCGCATCA TCAGACCGAG TGCGGACTAT
ATCGGCTCTG CGCCGCGTAA AGTGGTGCCA ATCAGCGAAA GATAA
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| Protein sequence | MVDKKLGGAG LRGQSAGETA LCTVGKSGSG LTYCGYDVSD LADNATFEEV AYLLFNGELP
NAAQLDAYKS ELMSMRDLPQ TLKEVLQRIP ADAHPMDVMR TGCSFLGNLE PETDFSQQNK
AANRLLAAFP AIMCYWYRFS HDGVEIDCVT DEDSLGGHFL KLLNGKTPSD QHRRVMDVSL
ILYAEHEFNA STFTARVCAS TLSDMFSCIT GAIGSLRGPL HGGANEAAME MIQKFSSPED
AKVQMAGMLE RKEKIMGFGH AIYRESDPRN VIIKAWSEKL AKEFGDTSLY DISVACEEYM
WDTKKLFCNA DFFHASAYHF MGIPTKLFTP IFVCSRLTGW AAHVMEQRAN NRIIRPSADY
IGSAPRKVVP ISER
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