| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1810 |
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| Symbol | |
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| ID | 4924383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2079784 |
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| End bp | 2080809 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640163371 |
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| Product | dihydroorotate dehydrogenase 2 |
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| Protein accession | YP_001093935 |
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| Protein GI | 127512738 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000129041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTACA AAATCGCACA GAAAGTGATG TTTCAGATGG ATCCTGAGAA GGCCCATAAC
CTTGCTATAG GCAGTCTGAA GTCAACTGCG AATTCGCCAT TAAACTGCTT TTATGCACAG
AAGCTGCAAG CAGCACCTGT CGAGTTTATG GGATTGACCT TTCCAAATCC TGTCGGCTTA
GCTGCCGGTA TGGACAAAGA TGGTGAATGT ATCGATGCGT TCCACGCCAT GGGATTTGGC
CATGTGGAAG TGGGTACGGT AACGCCACGT CCACAGCCTG GTAATGATCA GCCGCGCCTG
TTTCGTTTAA AGCCGGCCAA GGCGATTATC AATCGCATGG GTTTTAACAA TAAGGGTGTC
GATAATCTGG TCGCTAACCT GAAGGCAGCC AAGTCTGGCG CCATGGTTGG GGTGAATATC
GGTAAGAACA AGGATACGCC GGTAGAGCAG GGCAAAGAGG ATTACCTCAT CTGTATGGAG
AAGGTTTACC CTTATGCAGC CTATATTGCG GTCAATATCT CATCGCCAAA CACACCAGGC
CTGCGCAGTT TGCAGTATGG CGATCTGCTT GATGATCTCT TGGGATCACT AAAAGCTAAG
CAGAAAGATC TTGCCGAGCG TCATGGAAAG TATGTGCCGA TCGCACTGAA AATTGCGCCG
GATCTTGAGC CAGACGAGAT TGAGAAAATT GCCGAGTCGC TCATTCGTAA CGAGTTCGAC
GGTGCTATCG CCACCAACAC CACGCTGACC CGCGACGGCG TCAGCGGTTT GGTGAATTCT
AACGAAGCCG GTGGCTTAAG CGGTAAGCCT TTGAATTCAT TGTCAACAAA AGTAATTAAG
CAATTGGCAG ATTGTCTGAA AGGTCAGGTG CCCATCATAG GGGTTGGTGG TATTAACAGT
GCTGCCGATG CGCTCGATAA ACTCGATGCG GGTGCAACCA TGGTACAAAT TTATTCTGGT
TTTATTTATC GCGGACCAGA ATTAATTAAA GAGATCGTCG ATGCTTATCG CGTAAAAAGT
AAATAA
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| Protein sequence | MFYKIAQKVM FQMDPEKAHN LAIGSLKSTA NSPLNCFYAQ KLQAAPVEFM GLTFPNPVGL
AAGMDKDGEC IDAFHAMGFG HVEVGTVTPR PQPGNDQPRL FRLKPAKAII NRMGFNNKGV
DNLVANLKAA KSGAMVGVNI GKNKDTPVEQ GKEDYLICME KVYPYAAYIA VNISSPNTPG
LRSLQYGDLL DDLLGSLKAK QKDLAERHGK YVPIALKIAP DLEPDEIEKI AESLIRNEFD
GAIATNTTLT RDGVSGLVNS NEAGGLSGKP LNSLSTKVIK QLADCLKGQV PIIGVGGINS
AADALDKLDA GATMVQIYSG FIYRGPELIK EIVDAYRVKS K
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