| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1809 |
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| Symbol | |
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| ID | 4924387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2074877 |
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| End bp | 2079721 |
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| Gene Length | 4845 bp |
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| Protein Length | 1614 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163370 |
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| Product | NAD-glutamate dehydrogenase |
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| Protein accession | YP_001093934 |
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| Protein GI | 127512737 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.785222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGA AAGATGCAAT GCCTTCAGTA CTACTCGAGA ACGTAGTCAG CCTAATTCAT
TCGAAAGTTC CCAATACACA AGCCAAACAA GTTGAACAGT TCGCAACTTG TATTTATGCC
CACATGTCGA AAGATGACTT GCAACACCGC AATGACAGTG ATCTTTACGG CGCCGTCCTC
AGCCTTTGGA ATGCCGCGAA CAAGACGCCA GTTGGCGAGA CCCATATTCG CGTGTTTAAC
CCGAGTCAAT CTAAGCATGG TTGGAAATCA TCCCACTCAA TTATCGAGGT GATTCAACCG
GATATGCCTT TCCTTGTTGA CTCTGTAGGC ATGGCGCTTA ACCGCATGGG CATCACCACT
CACATGATGC TGCACACGCC GTTAACCGTG AAGCGTGACC AAGGCGTGAT CACAGGTGTT
AGCTACAACG ACGATAAGGA CGAGAGCAAC GACAAGGTTG CCGTGTTCCT GATCGAGGTG
GACAGACTAA GCAGCGACGC CGATATCAAG AGCCTGGAAA AAGAGATTCA ATCTGTATTG
GGTGACGTGG CTGCATCGGT CAACGACTGG CAGGCGATGT CGAACAAGCT GAGCGAGACC
ATCGCCGAGC TGCCTAGCCG TCCATTCCCG GGTGAGAAGC GTGAGCTGGA TGAGGCCATC
AACTTCCTGA CCTATCTGAA CAATCACCAT TTCACCTTGT TGGGTTATCG CCGTTACGAC
CTGCACAAGG TCGAGGGCGA TCTCGAGCTG CTGCCGGCTA ACGAGACCAG CCTGGGTCTG
ATGAATGTAC CGGGTAAGCC TAAGAGTTCT AAGGGACTCA TGCTTTCCAG CCTGTCAGAT
ACCGCACGTA AAGAAGCACT CGACAGCAGT CTGCTTATCC TGACCAAGAG CACTGAGAAG
AGCCGCGTTC ACCGCCCAGC CTATGTCGAC TATATCGGCA TCAAACGTTT CGACGAGCAG
GGTAATGTTA TTGGTGAAGA CAGATTCATC GGCCTGTACG CCTCAAACCT GTACAACCGT
AGCCCACGTG AGATCCCGCT GCTGGCAGAG AAGATCCAGC GCGTACTGGA CGATTCTGGC
CTGACGCCGC ATTCTCACGA CTACAAGGCT TTGATGCATA TTCTGGAAAC CTTACCGCGT
GACGAGATCG TCCAGGCACG GGAATCTGAA CTGGCCAGCA TGGCTCATGG CGTACTCGAG
ATGCAAGATC GCGACAAACT CAAGCTGTTT GTGCGCAAGG ATGGCTTCGG TCGTTTCCTC
TCTTGCCTGG TATACGTCTC TAAAGACAGA TACAACACTA AGCTGCGTGA AGATACTCAA
CGTATTCTGG CGCAACACTT CAACACTAAA GAAGATGTTG AATTTACAAC TTATTTCTCT
GAGTCTACGC TCGCGCGTAC TCACTATATA GTCAAAGTCG ATAATAATAT TACGGATGTA
GATGTGGCTG CCATCGAAAA CAATCTAATT GAAGCTGCGC GTTCATGGGA AGACAAGTTA
AACACAGCGC TGATCACTGC CCAAGGCGAA GAGTCTGGCA ACCGTTTGGT CAAACGTTAT
GTGAATGCGT TCCCACGCAG CTACAAAGAA GATGTGTTGC CTAGCTCTGC CGTGGTGGAT
ATCGAGCACT TAGAAGCGCT GGATGATGAT CACAAGCTTG GCATGCTCTT CTATCAGCCA
CAGGAAACTG CGCTTAAAGA CAACAAGGTG CGCCTGAAAC TCTTCCATAA AGATGAGCCA
ATCCATCTGT CTGATGTATT GCCTATGCTG GAAAACTTCG GCCTGCGCGT GATCAACGAG
CGCCCATATG AAGTGATGAC CGCCGATGGT TCTACCTTCT GGATCCTTGA CTTCTTGATG
ACGGTACAAG GCGCTGCGGT TGATAACCTG GCCGACAGCC AAGATAGATT CCAGACAGCC
CTGTCACAGG TGTGGCGTAA AGAGCTGGAA GATGACGGCT TTAACCGTCT GGTATTGGCG
ACCGGTCTGT CTGGCCGCGA AGTGTCAGTG CTACGTGCCT ATGCTAAATA TATGCGTCAG
ATCGATGCAA CCTTCAGTCA GGCCTACATC GAAGAGACCT TTAGCAGCTA CCCACAGATA
GCCGATCTGC TGGTGAAGAT GTTTATCCGT AAGTTCAACC CTAAGCTAAA GACTCGTACT
CTGGCTAAGT TTGTTGAACA GATCGATATG CGTCTGGAAG ATGTGTCTAG CCTGGATGAC
GACCGTATCA TTCGTCGTTA CCTGGATCTG ATCAACGCCA CGCTGCGTAC CAACTTCTAT
CAGGTGCTGC CAGACGGTAG CAACAAGCCA TACGTGTCAT TCAAGTTCTC GCCAGAAGAG
ATCCCAGAGA TGCCACGTCC GCTACCTAAG TTTGAGATCT TCGTTTACTC TCCAAGGGTA
GAGGGTGTTC ACCTGCGTGG TGGCAAGGTT GCCCGCGGTG GTCTGCGCTG GTCTGACCGT
CGTGAAGACT TCCGTACCGA GGTACTGGGT CTGGTGAAAG CCCAGCAGGT GAAGAACACA
GTTATTGTAC CTGTGGGCGC CAAGGGTGGC TTCGTCTGTA AGCAACTGCC TACCGAAGGT
GGCCGCGATG CCTTCTTCAC TGAAGGCCAA GAGTGTTACC GCCTGTTTAT CCGCGGTCTG
CTGGATATCT CTGACAATAT CGTCGAAGGC GAAATCGTTC CTCCGGCAAA CGTGGTTCGT
CACGATGAAG ACGATCCATA TCTGGTTGTG GCGGCCGACA AAGGTACCGC GACTTTCTCA
GATATCGCTA ACGCTATCTC TGAAGAGTAT GGTTTCTGGC TAGGCGACGC CTTCGCATCG
GGTGGTAGTA ACGGTTACGA CCATAAGAAG ATGGGTATCA CGGCGCGCGG CGCGTGGGAA
TCGGTTAAGC GTCACTTCCG TGAGATCGGC GTTGACTGTC AGACCACAGA TTTCACCTGT
TTGGCGATCG GTGATATGGC CGGTGACGTA TTCGGTAACG GTATGCTGCT TTCTGAGCAC
ACACGTCTGG TGACGGCATT TAACCATATG CATATCTTCA TCGACCCGAA TCCGGATGCG
GCTAGCAGCT ATAAAGAGCG TGCGCGTCTG TTCGAGATGC CGCGTTCAAG CTGGGAAGAT
TACAATAAAG ATTTGATCTC TAAGGGCGGT GGAATATTCC TTCGCTCGGC CAAGTCAATC
ACCCTGACAC CTGAAATGAA GAAGATGCTG GATACCAAGA AAGCATCTAT GACACCAAAC
GAGCTGCTTA AAGAGCTGCT GAAGATGAAG GTGGATCTGA TCTGGAACGG TGGTATTGGT
ACCTACATCA AGGCGACCAG CGAGACGCAC GCCGAGGTGG GTGACCGCGC CAACGACGCA
CTGCGCGTCA ACGGCAACGA AGTTCAGGCC CGCATCATAG GCGAGGGTGG CAACTTAGGT
TGTACTCAAC TGGGTCGTAT TGAATACGCC GCCAACGGTG GCCGCATGAA CACCGACTTC
GTGGATAACG TGGGTGGTGT GGACTGTTCG GACAACGAAG TTAACATCAA GATCTTGCTG
AACGCCATGG TGGCCGAAGG TGAGATGACG GTGAAACAGC GTAACCGTCT GCTGGTTGAG
ATGACTGACG AAGTCAGCCG CATCGTACTG CAAGACTGTA AGGATCAGAC CCGTACCATC
TCTGTGACTC AGGTGCGCGG CGCCGAGCAG TTGAAAGAGC AGATCCGCTT CATCCATTAT
CTGGAGAAGG AAGACAAGCT AGACAGAGCA CTCGAGTTCC TGCCGACCGA TGATGAACTG
GCAGAGCGTT TAGCGAACGG TAAGTCACTG ACTCGCCCTG AGCTTTCTGT ACTGGTGGCC
TACGCCAAGA TGGTATTGAA AGAGCAACTG CTCACGCCGG AAATTACCGA CGATTCATTC
TTGAGCCAGC TGCTTATCGA ATACTTCCCT CGTCAGCTAC AGGAGAAGTA CAGCGAGCGT
ATGGTGACGC ACCCGCTGCG CGCCGAAATC ATTGCTACCT CTTTGGCCAA CGAGTTGGTT
AACGACATGG GCTTGAATTT TGTTCAGCGT ATGCAAGATG AGACAGGTGC CTCAGTCGCC
GAAGCCGCTA TCTGCTACAC TATGGCTCGT GAAGTATTTG GTTTAGCTGA ATTAACTAAA
TCGATCACGG CGCTAAACGG TGTGGTACCT GCTGTGGTTC AGGGTGAGAT GCTGCATCAG
TTGCGTCGTA ATCTACGTCG CGCGTGTCGT TGGTTCTTAC GTCATCGTAA CCGTAACCAA
AGCATTGAGC AGGTTGTGGC CTTCTTTAGC CCAGTGTTCC AGGAACTTCG TCAGAACGTT
CATCAGTATC TGGTGGAAGA TGAAGTTAAC GGCATCCGCG CCGAGATTGC AGCGCTGGTG
AAAGAAGGAG TACCAGAGCA GGTGGCGACC GATGTCGTCA ACATGAGCAC ATTGTTCTCT
GCACTGGATA TCTCACAAAT TGCCGAGCTG GAAGACAAGC CAGTGGCCTT GGTTGCCGAG
ACCTACTACA AGCTAGGTGC TCGTATTGAC CTGCACTGGT TCCTCGAGCA GATCAGTGCC
CAGCCTGTGG CTAACCACTG GCAGGCGCTG GCGAGAGCGG CATTTAGGGA AGAACTCGAT
TGGCAACAAC GTTCACTGAG TTCAGTGGTA TTACGTACCT GCCCATCGGT TTGTGAAGCT
GACGCCATTA TCGATCAGTG GGTCGAATCC AATCAGGGCT TATTGGAGAG ATGGTTCCAC
ATGCTTGCAG ACTTTAAGAC CTCGCAGACC CATGAGTTTG CGAAGTTCTC AGTCGCCCTA
CGTGAGCTGA ATCTGTTGAT CCTTCATTGC GAAGGTCAAT CGTAA
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| Protein sequence | MALKDAMPSV LLENVVSLIH SKVPNTQAKQ VEQFATCIYA HMSKDDLQHR NDSDLYGAVL
SLWNAANKTP VGETHIRVFN PSQSKHGWKS SHSIIEVIQP DMPFLVDSVG MALNRMGITT
HMMLHTPLTV KRDQGVITGV SYNDDKDESN DKVAVFLIEV DRLSSDADIK SLEKEIQSVL
GDVAASVNDW QAMSNKLSET IAELPSRPFP GEKRELDEAI NFLTYLNNHH FTLLGYRRYD
LHKVEGDLEL LPANETSLGL MNVPGKPKSS KGLMLSSLSD TARKEALDSS LLILTKSTEK
SRVHRPAYVD YIGIKRFDEQ GNVIGEDRFI GLYASNLYNR SPREIPLLAE KIQRVLDDSG
LTPHSHDYKA LMHILETLPR DEIVQARESE LASMAHGVLE MQDRDKLKLF VRKDGFGRFL
SCLVYVSKDR YNTKLREDTQ RILAQHFNTK EDVEFTTYFS ESTLARTHYI VKVDNNITDV
DVAAIENNLI EAARSWEDKL NTALITAQGE ESGNRLVKRY VNAFPRSYKE DVLPSSAVVD
IEHLEALDDD HKLGMLFYQP QETALKDNKV RLKLFHKDEP IHLSDVLPML ENFGLRVINE
RPYEVMTADG STFWILDFLM TVQGAAVDNL ADSQDRFQTA LSQVWRKELE DDGFNRLVLA
TGLSGREVSV LRAYAKYMRQ IDATFSQAYI EETFSSYPQI ADLLVKMFIR KFNPKLKTRT
LAKFVEQIDM RLEDVSSLDD DRIIRRYLDL INATLRTNFY QVLPDGSNKP YVSFKFSPEE
IPEMPRPLPK FEIFVYSPRV EGVHLRGGKV ARGGLRWSDR REDFRTEVLG LVKAQQVKNT
VIVPVGAKGG FVCKQLPTEG GRDAFFTEGQ ECYRLFIRGL LDISDNIVEG EIVPPANVVR
HDEDDPYLVV AADKGTATFS DIANAISEEY GFWLGDAFAS GGSNGYDHKK MGITARGAWE
SVKRHFREIG VDCQTTDFTC LAIGDMAGDV FGNGMLLSEH TRLVTAFNHM HIFIDPNPDA
ASSYKERARL FEMPRSSWED YNKDLISKGG GIFLRSAKSI TLTPEMKKML DTKKASMTPN
ELLKELLKMK VDLIWNGGIG TYIKATSETH AEVGDRANDA LRVNGNEVQA RIIGEGGNLG
CTQLGRIEYA ANGGRMNTDF VDNVGGVDCS DNEVNIKILL NAMVAEGEMT VKQRNRLLVE
MTDEVSRIVL QDCKDQTRTI SVTQVRGAEQ LKEQIRFIHY LEKEDKLDRA LEFLPTDDEL
AERLANGKSL TRPELSVLVA YAKMVLKEQL LTPEITDDSF LSQLLIEYFP RQLQEKYSER
MVTHPLRAEI IATSLANELV NDMGLNFVQR MQDETGASVA EAAICYTMAR EVFGLAELTK
SITALNGVVP AVVQGEMLHQ LRRNLRRACR WFLRHRNRNQ SIEQVVAFFS PVFQELRQNV
HQYLVEDEVN GIRAEIAALV KEGVPEQVAT DVVNMSTLFS ALDISQIAEL EDKPVALVAE
TYYKLGARID LHWFLEQISA QPVANHWQAL ARAAFREELD WQQRSLSSVV LRTCPSVCEA
DAIIDQWVES NQGLLERWFH MLADFKTSQT HEFAKFSVAL RELNLLILHC EGQS
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