| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1808 |
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| Symbol | |
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| ID | 4924388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2072309 |
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| End bp | 2074612 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163369 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093933 |
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| Protein GI | 127512736 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGATA AATTAGTTAA TGGATTAGAA TCCTTCCTGT TTCGGCAACG GGCCTATGTG
ATATTCGCCT TCTTGCTGGC AACATTGTTT CTCGGTTTCC AGGCCAGCCA TCTGAAGATG
GATGCCGCGT TCGTTAAGAA CATTCCGCTC AATCATAGCT ATATGCAGAC CTATCTGAAG
CATCAGAAGC AGTTTGGTGG CGCCAACAGC ATCATGGTGG CGGTGGAAGA CAGCAGTGGC
AACATCTTCA ACCCAAACTT TTTCGATACC CTAAAACAGG TACACGATCA GCTGTTCTTC
ATCCCAGGCG TCGATCGCGC CCAGGTGAAG TCGCTCTATT CACCCTCGAC CCGCTTTACC
GAGGTGGTGG AAGATGGTTT TGCCGGCGGC CCGGTGATCC CGGCGGATTT CTCGACTACC
CCTGCCGGGC TTGAGGTGGT GCGTAGCAAC ATAGAGAAGG CAGGCATAGT CGGGCGTCTG
ATCGCCGAGG ATTACTCGGC GGCCATGGTG ACCGCTCAGC TGATGGACTT CGATCCTCAG
ACCGGCGAGC CACTCGATAC CCTGGCCTTT GCCAGTCAGC TCGAGAAGGA GCTGCGCGGC
CAGTATGAAA ACGACAAGAT AAAGATCCAT ATCATTGGCT TTGCCAAGAT GGCCGGCGAT
GTGGCCGAGG GGGCCAAGGG CGTGGTGCTC TTCTTCGCCA TCGCCATCTT GGTAACGGCC
GTGATGGTGT ATCTCTTCTC CCACTCGGTC AAGCTAACCC TGCTGCCTTT GGTGTGTAGC
CTAGTAGCTG TGGTTTGGCA GCTGGGTCTG CTCACCGTGG TTGGCTTTGG CCTGGACCCT
ATGTCGATTC TCATTCCCTT CCTGGTATTT GCCATCGGGG TGAGTCACGG TGTGCAGATG
ATCAACGCCG TCAGGCGCCG TGTGGGTGAG GGGGAAACCA CTAAGGCCGC CGCCGCGCTG
GCATTTCGTA GCCTGCTGAT CCCAGGCGGG GTGGCGCTGC TTTCCGATAC CGTGGGCTTC
ATGACACTGC TGGCCATCGA TATCGGTATC ATTCGCGAGC TGGCTATCTC GGCCTCACTG
GGTGTGGCGG TGATCATCCT GACCAACCTG GTGCTGCTGC CGCTGCTAAT CTCCTTTACC
GAGGTCAAGG CGCTGCCGAC CAAGTCTAAC GGTAAGGTGG ATGCGCTCTG GCGTAAGCTC
TCTAATTTCG CCACGCCCAA GTATGCGGTT ATCGTGTTGC TGGCTACCGT CGCCCTCTAT
GGCGTCGGCC TGCAGCAGGC GAGTAAGATG AAGATCGGCG ATCTCCAAGG CGGCGCGCCG
GCGCTGCATT TTGACAGCCG CTACAATCAG GACACCTTCT ATATTACCGA TCACTTTTCT
ATTACCACAG ATGTGATGAC TGTAATTGTC GAGGCGTTTC CCGAGGCTTG TACCTATCAT
GATGTGCTGA CCCAGATAGA TGAGTTTGAG TGGTTGGTGG CTAATACTCC GGGGGTTGAG
TCGACCGCGA GTCTTGCCTC TATTGCTAAG CGGGTCAACG CTGGTTTCAA CGAGGGTAAC
CCTAAGTGGC AGGTGCTGCC TCGCACCACG GCGAGTCTGG TCCAGGCGGT AGGGCAGATC
CCGACCACCT CGGGTCTGCT AGACGGTAAC TGCTCTGTGA TGCCTGTGTA TCTGTTCCTG
AAAGATCATA AGGCGGAGAC CATTGAGCAG GTGATCGACA AGGTTAAGAC ACTGTCGGCC
AAGATGGACA GCGACAAGCT CAAGTTTAAG CTGGCCTCAG GCCCGGTTGG TGTGATGGCG
GCGACCAACG AGGCGGTGGC CGAGGCGCAA CTGCCTATGA TGCTCTATGT CTATGGCGCC
GTGTTTGTGC TCTGTTTAAT CAGCTTCAGA TCGATTCGCG CGACGGTGGC GGTGATCCTG
CCGCTCTATG TGGTATCGAC CCTGGCGCAG GCGCTGATGA CTCAGCTCGA TATCGGTCTG
GCGGTGAGCA CTCTGCCGGT GATCGCCCTA GGTGTGGGGA TAGGTGTGGA TTATGGTATC
TACATCTTGT CGACCATGGC GGTCAAACTC AGAGACGGCA TGCCGGTGCA AACCGCCTAT
CATCAGGCGC TTATTGAGCG GGGCAGCGCG GTGATCTTCA CCGGTCTGAC ACTGGCGATT
GGCGTGAGCA CCTGGTTCTT CTCTGCACTT AAGTTCCAAA TGGACATGGG GATCCTGTTA
ACTTTCATGT TTTTAGTGAA TATGTTGGGT GCAATAATTA TTTTGCCTGC GATAGGCGCG
GTTTTCTGGC GTAAGCCGCG ATAG
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| Protein sequence | MLDKLVNGLE SFLFRQRAYV IFAFLLATLF LGFQASHLKM DAAFVKNIPL NHSYMQTYLK
HQKQFGGANS IMVAVEDSSG NIFNPNFFDT LKQVHDQLFF IPGVDRAQVK SLYSPSTRFT
EVVEDGFAGG PVIPADFSTT PAGLEVVRSN IEKAGIVGRL IAEDYSAAMV TAQLMDFDPQ
TGEPLDTLAF ASQLEKELRG QYENDKIKIH IIGFAKMAGD VAEGAKGVVL FFAIAILVTA
VMVYLFSHSV KLTLLPLVCS LVAVVWQLGL LTVVGFGLDP MSILIPFLVF AIGVSHGVQM
INAVRRRVGE GETTKAAAAL AFRSLLIPGG VALLSDTVGF MTLLAIDIGI IRELAISASL
GVAVIILTNL VLLPLLISFT EVKALPTKSN GKVDALWRKL SNFATPKYAV IVLLATVALY
GVGLQQASKM KIGDLQGGAP ALHFDSRYNQ DTFYITDHFS ITTDVMTVIV EAFPEACTYH
DVLTQIDEFE WLVANTPGVE STASLASIAK RVNAGFNEGN PKWQVLPRTT ASLVQAVGQI
PTTSGLLDGN CSVMPVYLFL KDHKAETIEQ VIDKVKTLSA KMDSDKLKFK LASGPVGVMA
ATNEAVAEAQ LPMMLYVYGA VFVLCLISFR SIRATVAVIL PLYVVSTLAQ ALMTQLDIGL
AVSTLPVIAL GVGIGVDYGI YILSTMAVKL RDGMPVQTAY HQALIERGSA VIFTGLTLAI
GVSTWFFSAL KFQMDMGILL TFMFLVNMLG AIIILPAIGA VFWRKPR
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