| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1807 |
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| Symbol | |
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| ID | 4924401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2071283 |
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| End bp | 2072296 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163368 |
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| Product | BNR repeat-containing protein |
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| Protein accession | YP_001093932 |
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| Protein GI | 127512735 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.120061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGTTTA GCATGCTTCG GCTTGTCGCT TTATCTTCAC TCTGTTTTGT CACTCTCGGC
GGGGCCCAAG CGGCAACCGA GGTGACAGGC TCCGATATTC AGCCGCTGGC GACGCACTCC
CTGGTATTGG ATATCGCCAA GCAGGGCGAG ACCATGATTG CCGTAGGCGA TCGCGGTCAT
CTATTCCGTT TTACCGATAG CTGGCAGCAG GTGGGTTCAC CCAGCCGTGC CTTGCTGACC
AAGGCGACCC TGTTAACGCC AGAGCTTGGC TGGGCAGTGG GCCATGATGC CACCATATTG
CATACCCAAG ACGGCGGTAA CAGCTGGGTA GAGCAGATGC GCTCTCCCGA AATTGAAAAG
CCGTTTTTGG ATGTGCTCTT CTTCGATGCC GAGCATGGTA TCGCCATTGG CGCCTATGGT
CTCTTCTATC GCACCCAGGA TGGCGGTAAG CAGTGGCAGC AAGAGTTTCA CACCGAACTT
TTGTATGAAG AAGATCAGGC GTATCTGGAT GAGTTAAAGG CTGAAGATGA AAGCCTTTAC
TTGAAAGAGC GCAGCACCTT ACTGCCTCAC TTTAATCGCG TGGTGCGCCT GGCCGATGAC
CGCCTCTTGA TGGTGGGCGA ACTCGGTTTA GCGGCCCAGT CACAAGATAA TGGCCTCACC
TGGCAGCGCA TCGAGTTCCC CTACGAGGGC TCGCTGTTTA ACATCTTAGT GGCTAAACAG
GGGATCTATG TGCTCGGGCT TCGCGGTCAC CTGTTTAAGA GCGAAGGGGA TCTCGAGCAG
TGGCAAGAGA TTGAGCTGAC CACAAAATCG ACCCTCAACG GCGGAGTGGT GCTGAGTGAC
GACAAGGTCA GGTTGGTCGG TAACGGCGGC GTGGTGATCG ACGTGGCCAG CGATGATAGC
GTGACTATGG TAACGCAGCG TCAGGGGGAA AACCTGGTGG CTATCGGTCA GGATAGGACG
GGTACACTGT GGATTGCCGG TACCAAAGGC TTAGTTGCAT TACAACAAAA ATAA
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| Protein sequence | MWFSMLRLVA LSSLCFVTLG GAQAATEVTG SDIQPLATHS LVLDIAKQGE TMIAVGDRGH
LFRFTDSWQQ VGSPSRALLT KATLLTPELG WAVGHDATIL HTQDGGNSWV EQMRSPEIEK
PFLDVLFFDA EHGIAIGAYG LFYRTQDGGK QWQQEFHTEL LYEEDQAYLD ELKAEDESLY
LKERSTLLPH FNRVVRLADD RLLMVGELGL AAQSQDNGLT WQRIEFPYEG SLFNILVAKQ
GIYVLGLRGH LFKSEGDLEQ WQEIELTTKS TLNGGVVLSD DKVRLVGNGG VVIDVASDDS
VTMVTQRQGE NLVAIGQDRT GTLWIAGTKG LVALQQK
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