| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1806 |
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| Symbol | |
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| ID | 4924397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2069771 |
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| End bp | 2071135 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163367 |
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| Product | hypothetical protein |
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| Protein accession | YP_001093931 |
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| Protein GI | 127512734 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00564831 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TAACACTATT GTCGGCAGCT GTGATCGTCG CATTGACCGC GCCAACAGCC
TTTGCAAAAG TATCAGAGGC CGAGGCGGCC AAGCTTGGCA CCGAACTCAC GCCGCTCGGC
GGTGAAAAGG CCGGTAACGC AGATGGCTCT ATCCCTGCCT GGGATGGCGG CATCACCAAA
CCTGTTGCGG GTTACGAGAA GGGGATGCAT CATCCAGATC CTTTCCCTGG CGATAAGATT
GAATTTACCA TCACTAATGC CAACAAGGCG CAGTACAAGG ATAACCTGAC CGAAGGCCAA
CTCAAGCTGT TCGATCTCTA TCCTGATACC TTCAAGATGA ATGTTTATCA GACACGCCGC
ACCGCCTCTG TGCCGCAGTT TGTCTATGAT GCGACTAAGG CCAACGCTTC GCGCGCAGAA
TTGGTGGCCG ATGGTAACGG TATCTCTGGC GCCTCAATCG GCGTGCCTTT CCCCATCCCA
CAAAATGGTC TCGAGGCTAT CTGGAACCAC GTGCTGCGTT TTCGAGGCGT AGATGTGGAA
ACCGCCCGTA GCCAGGCGGC GCCTACAGCA TCTGGTAGCT ACACCTTGGT GGAAACCGCC
GAAGAGATCC GCTTCGAGTA CTCTCGTCCC GAGATGACTC TGGATAAACT AAAAGAGTCG
AACACCCTGT TCTACTTTAA GCAGGTGGTG ACACAGCCGG CACGTCTGGC GGGTACCGCA
CTGTTGGTGA AGGAGACCAT GGATCAAGAG GCGCTACCGC GTCAGGCCTG GACCTATAAC
ACAGGGCAGC GCCGCGTGCG CAAGGCGCCA AACGTCGCCT TCGATACTCC GGGTACTGTG
TCTGATGGTC TGCGCACCAC AGACGATTTC GATATGTTCA ACGGCTCGCC AGTGCGTTAC
AACTGGGAAC TGCTAGGCAA GAAAGAGATC TACATTCCTT ACAACGACTA CAAGCTGCAC
TCAGATAAGC TCAAGTATGA GCAGATCCTG AAACCAGGCC ACATCAACCC AGATTATGTG
CGCTGGGAGA AACATCGCGT GTGGGTGGTC AAGGCTCAGC TGAAGGAAGG GATGCGTCAT
ATCTACAAGA CCCGCGTCTT CTATCTGGAT GAGGATTCTT GGCAAGTGTC TATGGCGGAC
ATGTACGACA ACCGCGATGA GCTTTATCGC GTCGCCGTGG CGCACGCCAT CAACTATTAC
GAAGTGCCGA CTCACTGGAC CACACTCGAA GTGATCCACG ATCTACAATC TCGCCGTTAC
CTGGCTATGG GTCTGGACAA CGAGGGTCGT ATGTATAACT TCGATGCCAA GTTGAGCGAA
GCGAACTTTA CCCCAGCGGC ATTGAGACGC GCTGGTATTC GTTAA
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| Protein sequence | MKKLTLLSAA VIVALTAPTA FAKVSEAEAA KLGTELTPLG GEKAGNADGS IPAWDGGITK
PVAGYEKGMH HPDPFPGDKI EFTITNANKA QYKDNLTEGQ LKLFDLYPDT FKMNVYQTRR
TASVPQFVYD ATKANASRAE LVADGNGISG ASIGVPFPIP QNGLEAIWNH VLRFRGVDVE
TARSQAAPTA SGSYTLVETA EEIRFEYSRP EMTLDKLKES NTLFYFKQVV TQPARLAGTA
LLVKETMDQE ALPRQAWTYN TGQRRVRKAP NVAFDTPGTV SDGLRTTDDF DMFNGSPVRY
NWELLGKKEI YIPYNDYKLH SDKLKYEQIL KPGHINPDYV RWEKHRVWVV KAQLKEGMRH
IYKTRVFYLD EDSWQVSMAD MYDNRDELYR VAVAHAINYY EVPTHWTTLE VIHDLQSRRY
LAMGLDNEGR MYNFDAKLSE ANFTPAALRR AGIR
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