| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1803 |
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| Symbol | pepN |
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| ID | 4921804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2064418 |
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| End bp | 2066979 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163364 |
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| Product | aminopeptidase N |
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| Protein accession | YP_001093928 |
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| Protein GI | 127512731 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0680327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGG TTAAGGCCAA ATATTTAAAA GACTATCGCG CACCGGATTT CACTATTACT
CAGGTGGACC TCTCCTTTGT GCTCGATGGT GCCAATACTC AGGTGACCGC GGTCAGCCAG
GTAAAGCGTC TAAACGATGC TGCACACACC CTTGAACTGG ACGGTGAAGG CTTAAGCGTT
AGCCAGCTGC TGGTCGATGG TAAGCTTCAT GATTATCGCG TCACCGAGGG GCAGCTGAGT
ATCGAAACCG ACTTAGCCGA CTTTGAACTC ACCATAGTGA CTAAGCTGGA TCCCGAGGCT
AACCTGGCGC TGGAAGGCCT ATACATGTCA GATGGCGCCT ACTGCACTCA GTGTGAGGCA
GAAGGGTTTA GACGCATCAC CTATTTCCTC GATCGCCCCG ATGTGCTGGC GATTTACAAG
GTGCGCATCG AAGCCGACAA GGCGGCGTTT CCTTACCTTC TGAGCAATGG TAACCGTGTC
GATACAGGCG AACTTGACGG CGGACGTCAC TTCGTCTGCT GGGAAGACCC TTTCCCGAAA
CCTGCGTACC TGTTTGCCTT AGTCGCGGGT GATTTCGATC TGCTGGACGA TAGCTTTACC
ACTAAAAGCG GCCGCGAGGT CGCGTTGCAG GTCTTCGTCG ACAAGGGCAA CCTGCACAAG
GCACACCACG CCATGGCATC GCTGAAGAAG TCGATGGCCT GGGATGAGAG CCGCTTCGAC
CTTGAGTATG ATCTCGATAT CTACATGATA GTCGCGGTGG ATTTCTTCAA CATGGGCGCC
ATGGAGAACA AGGGTCTAAA CGTGTTCAAC ACTAAATATG TGTTGGCAGA TAAAGACTCG
GCGACCGATG AAGATTATCA CGGCATCGAG TCTGTAGTGG GCCACGAGTA TTTCCATAAC
TGGACTGGCA ACCGCGTCAC CTGCCGCGAC TGGTTCCAGC TGAGTCTGAA AGAGGGCCTG
ACGGTGTTTC GCGATCAGGA ATTCAGCTCA GATGTGGGCT CCCGGGCGGT CAACCGAATC
CATGCCATCA AGGTGATCAA GAATCAGCAG TTCGCCGAAG ACAGCGGCCC AATGGCCCAT
GCCATTCGTC CCGAATCTGT GATCGAGATG AATAATTTCT ATACCGTGAC CGTCTACAAC
AAGGGCGCTG AGGTGATCCG CATGATGCAC ACCCTGCTCG GTGAACAGGG TTTCCAGGCG
GGGATGAAGT GTTATTTTGA GCGCCACGAT GGTCAGGCCG TGACCTGCGA TGATTTCGTC
GCGGCGATGG AAGATGCCAG CGGTGTGGAT CTGACTCAGT TCAGACGTTG GTATAGCCAG
TCGGGTACCC CTGAGCTCTC GGTAGCCGAG TGCTATGACG CCGAAAAACA AGAATATCGT
CTGAGCCTGC GCCAGCATAC GCCGCCGACG CCGGAGCAGA GTGAGAAGTT ACCGCTGCAC
ATTCCGCTCG ATCTCGAGCT GCTTGGCAGC GACGGACGCT CGCTGCTCTG CCAGGTCTTT
AGCATCACTG AAGCCGAGCA AGAGTTAGTG TTTAACGGTA TGAGCGAGCA GCCTGTGCCG
TCACTGCTGC AAAATTTCTC CGCGCCGGTG AGACTCAACT TCGACTATAA CGTAGAGCAA
CTTATCCACC TGATGCGCTA TGCCAGCAGT GAGGTGGCCA AGTGGGAGGC CTCGGCCGCA
CTCTTTAGCC AGGCGGTTTG GCAAAATGTG GCCCACCTCA AGGCGCAGAA GGCTATGTAT
GTCGACCCTC GTCTGGTCGA TGGGGTGAAA GGCTTACTGC TCGATGAGCA GTTAGATCAG
GCATTGCTGG CAGAGGTACT TAGGTTCCCA AGCCTGAATA CCCTGGTAGA GCAGGTGACT
TGTGTCGATC TCGACGCCCT GGCTGCGGCC CGCGAGTTTA TGCTCGAGGA GATCGCCGCT
GGCTGTGAAG ATGAGCTGCT TGCGCGTTAT CGTGAGCTGA GTCTGTTAGA CGATGCCGGG
GCGAGAGCCC TGAAGAATGC CTGCCTCGGA TTATTGCTGC AAACGTCGGA TGCCCATCAA
GGCCTGGCCC TGCGCCAATA TGAACAGGCT GGCAACATGA CAGATAGCCT GGGCGCTTTG
GCCGCGCTCA ACCTTGAGCA GTCTGAGCTG CGCGCCAGTC TGCTGCAAGA CTTCCAACAG
AAGTGGGCAG ATACGCCTTT GGTGATGGAT AAATGGCTGA CGCTGGAGGC ATGCTGTCCG
GGTGAAGATC GCTGTGACGC ACTGCGTGAG CTTACCCAGC ACAGCGCCTT TAGCTTCGCC
AACCCCAACA GGGTACGCTC CTTGATCGGC GCCTTCGCGG CGGCAAACCC AGAGGTGTTC
CACCGCATTG ACGGCAGTGG TTATCGCTTC CTGACTGAAG CTATCATTAA ACTTAATACC
TTAAACCCTC AGGTAGCTGC ACGTATCATT ACGCCGCTGA TCCAATTTAA GAAGTTTGAT
GAAAAGCGCC AGCAGTTGAT GCGTAGTGCC CTGCAGGAGA TATTGGCCTT GCCGGATCTG
TCTAAAGACC TTTATGAGAA GGTCTCTAAG GCGCTGGCAT AG
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| Protein sequence | MAQVKAKYLK DYRAPDFTIT QVDLSFVLDG ANTQVTAVSQ VKRLNDAAHT LELDGEGLSV
SQLLVDGKLH DYRVTEGQLS IETDLADFEL TIVTKLDPEA NLALEGLYMS DGAYCTQCEA
EGFRRITYFL DRPDVLAIYK VRIEADKAAF PYLLSNGNRV DTGELDGGRH FVCWEDPFPK
PAYLFALVAG DFDLLDDSFT TKSGREVALQ VFVDKGNLHK AHHAMASLKK SMAWDESRFD
LEYDLDIYMI VAVDFFNMGA MENKGLNVFN TKYVLADKDS ATDEDYHGIE SVVGHEYFHN
WTGNRVTCRD WFQLSLKEGL TVFRDQEFSS DVGSRAVNRI HAIKVIKNQQ FAEDSGPMAH
AIRPESVIEM NNFYTVTVYN KGAEVIRMMH TLLGEQGFQA GMKCYFERHD GQAVTCDDFV
AAMEDASGVD LTQFRRWYSQ SGTPELSVAE CYDAEKQEYR LSLRQHTPPT PEQSEKLPLH
IPLDLELLGS DGRSLLCQVF SITEAEQELV FNGMSEQPVP SLLQNFSAPV RLNFDYNVEQ
LIHLMRYASS EVAKWEASAA LFSQAVWQNV AHLKAQKAMY VDPRLVDGVK GLLLDEQLDQ
ALLAEVLRFP SLNTLVEQVT CVDLDALAAA REFMLEEIAA GCEDELLARY RELSLLDDAG
ARALKNACLG LLLQTSDAHQ GLALRQYEQA GNMTDSLGAL AALNLEQSEL RASLLQDFQQ
KWADTPLVMD KWLTLEACCP GEDRCDALRE LTQHSAFSFA NPNRVRSLIG AFAAANPEVF
HRIDGSGYRF LTEAIIKLNT LNPQVAARII TPLIQFKKFD EKRQQLMRSA LQEILALPDL
SKDLYEKVSK ALA
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