Gene Shew_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1799 
Symbol 
ID4924336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2060579 
End bp2060875 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content42% 
IMG OID640163360 
ProductYebG family protein 
Protein accessionYP_001093924 
Protein GI127512727 
COG category[S] Function unknown 
COG ID[COG3141] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.104805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTTA TAACGAAATT TGTCGTAGTC AGAGAAGGGG TGGAGAAGAT GACATTCACA 
TCTAAGAAGG AGGCGGATGC CTACGATAAG ATGCTCGATA TCGCGGATAA TCTTCTTCCT
TTTATCGAGC AAGTTGATTT AGGCTTAGAT GAAAATGCAT TGGAACAACT CTGTTTCTAC
ATGGCAGAAC ATAAAGATCA GCTCATGGGA CTCTTAAAAG GTGGCGCAGT GACTAAGGCA
GCACCGGCTA AGAAACCTGC CAAAAAAGCA GAATCAAAAG CTGAAACGAA AACATAA
 
Protein sequence
MAVITKFVVV REGVEKMTFT SKKEADAYDK MLDIADNLLP FIEQVDLGLD ENALEQLCFY 
MAEHKDQLMG LLKGGAVTKA APAKKPAKKA ESKAETKT