| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1797 |
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| Symbol | |
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| ID | 4924391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2059083 |
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| End bp | 2059715 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163358 |
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| Product | paraquat-inducible protein A |
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| Protein accession | YP_001093922 |
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| Protein GI | 127512725 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0702887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGC TCAGCAAGCC TCCTCAAGGC GAATCATTGG GGCTGACCAA CTGCCCTACC
TGCAAGTTTC TGTGCCATCT CGAGCAGGGT AACTGCCCGC GCTGCGGACA AGCGGTGCAG
AGCCGGGATC GCACCAGCGT ACAGAAGAGC TGGGCGCTAC TGATCACCGC CGCCATCTTG
CTGTTTCCGG CAAACCTCTA CCCCATCACT ATCATGACCA GTCAAGGGCA GGTTCGCCAG
GACACCATCT TCAGCGGCAT CAACCATCTG GTGCACCTAG ACCTATTACC TATTGCCATT
ATTCTGTTTA CCGCCAGTAT CTTAGTGCCT ATGTTGAAGA TTTTTGGGCT GGCGCTCTAT
CTGACGGCGA TCAGCTATCG CCTGCCGATC TCGAAAAAGA CACTCATGGC TGGCTTTCAT
ATCATCGAAT GGATAGGCCG CTGGTCAATG CTAGATCTGT TTGTGATCTC CATTACCGCG
GCGCTCATAA ACATGGGACA GATTTGGGAT GCCAAACCTG CACCGGCGGC CACCGCCTTC
GCCTTGGTGA TCCTGCTGAC ACAGCTGGCG GCAAAAGTAT TAGACACGCG TTTACTCTGG
GACCGATTGG AATCGAAAGA TGACACAAAT TGA
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| Protein sequence | MSKLSKPPQG ESLGLTNCPT CKFLCHLEQG NCPRCGQAVQ SRDRTSVQKS WALLITAAIL
LFPANLYPIT IMTSQGQVRQ DTIFSGINHL VHLDLLPIAI ILFTASILVP MLKIFGLALY
LTAISYRLPI SKKTLMAGFH IIEWIGRWSM LDLFVISITA ALINMGQIWD AKPAPAATAF
ALVILLTQLA AKVLDTRLLW DRLESKDDTN
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