Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1788 |
Symbol | |
ID | 4921263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2046229 |
End bp | 2046726 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640163349 |
Product | CreA family protein |
Protein accession | YP_001093913 |
Protein GI | 127512716 |
COG category | [S] Function unknown |
COG ID | [COG3045] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.804701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGA AAGCTTGGAT TGGAATCATG TTTGCCGCAG CAACAAGCCT GCTGGCGGGC TGCGGCGATG ATGTGGGCAA AGTGAGCCTG GGGGTCTTTA CCACCAAGGA TGTGATTATC GAGGCCAGGC AAGATCCTAA GATCCCCGGC GTGACCTGTC ATATCAGTCG TATCGAGGCG AATCTAGACT TTGCCGATCC GTCGGATATG GGGATCGCCT GTCGTCAGAC AGGGCCGATT TTGCCTGCGG ATCTCGCCAA TATCGACAAG AGCCACGGCG GCGAGGTGGT GTTTAAGGCT TCACTGAGTA TCTTGTTCAA ATCCCTCAAG GTGAGACGCA TCTATGACGT CGACAGCCAG ACGCTGATCT ATCTCTCATA CTCCACCAAG GAGACAGATG GCAGCCATAA GCACAGCCTG TCGACCGTGC CCCTGTACGG CACCCAGGCC TGGCAAGCGC CTGCGGCGCA AAACGGAGAG CCAGCGGCTA AGAACTGA
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Protein sequence | MKMKAWIGIM FAAATSLLAG CGDDVGKVSL GVFTTKDVII EARQDPKIPG VTCHISRIEA NLDFADPSDM GIACRQTGPI LPADLANIDK SHGGEVVFKA SLSILFKSLK VRRIYDVDSQ TLIYLSYSTK ETDGSHKHSL STVPLYGTQA WQAPAAQNGE PAAKN
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