| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1785 |
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| Symbol | |
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| ID | 4924349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2042287 |
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| End bp | 2043090 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163346 |
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| Product | band 7 protein |
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| Protein accession | YP_001093910 |
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| Protein GI | 127512713 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCT TAGCCTACAA TACCCAGCTG TTCTTCGTCG CCCTCATCTT CCTGCTGGTG
TCACTGCTTA TCAGCACCTT CAAGATCCTG CGGGAATATG AACGCGGGGT GATCTTCATG
CTCGGGCGCT TCTACCGGGT CAAGGGCCCA GGCCTCATCA TAGTGATCCC CCTGGTGCAA
CAGATGGTGC GGGTGGATCT GCGCACCGTG GTGATGGATG TGCCGACTCA GGATGTGATC
AGCCGCGACA ACGTCTCGGT ACAGGTCAAT GCCGTGATCT ACTTTCGGGT GATAGACGCC
CAGAAGGCGA TCATCAATGT GGAGGATTTT CTGCAGGCCA CCTCCCAGCT GGCGCAGACC
ACGCTGCGCT CGGTACTCGG GCAACATGAG CTGGACGAGA TGCTGGCCAA TCGCGATATG
CTCAACACCG ACATTCAGTC TATCCTCGAC AGCCGCACCG ACGGCTGGGG GATCAAGGTC
TCTAACGTGG AGATAAAGCA TGTGGATCTC AACGAGACCA TGGTGCGCGC CATCGCCAGA
CAGGCAGAGG CGGAGCGGAT CCGTCGCGCC AAGGTGATCC ACGCCTCGGG CGAGATGGAG
GCCTCGGCCA AGCTGGTAGA AGCGGCGCAG AACCTGAAAA AATCGCCCAA CGCCATCTTA
CTGCGTTACC TGCAGACCCT GACAGAGATC GCCGGCGAGA AGAACTCGAC TATCCTCTTC
CCTCTGCCGA TGGACCTCCT CAAGGGGGTG CTAAACCGGG TTAGCGACCA GGAGGAGACC
CCGGCAAAGA AAACCGAGGA CTAA
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| Protein sequence | MQALAYNTQL FFVALIFLLV SLLISTFKIL REYERGVIFM LGRFYRVKGP GLIIVIPLVQ
QMVRVDLRTV VMDVPTQDVI SRDNVSVQVN AVIYFRVIDA QKAIINVEDF LQATSQLAQT
TLRSVLGQHE LDEMLANRDM LNTDIQSILD SRTDGWGIKV SNVEIKHVDL NETMVRAIAR
QAEAERIRRA KVIHASGEME ASAKLVEAAQ NLKKSPNAIL LRYLQTLTEI AGEKNSTILF
PLPMDLLKGV LNRVSDQEET PAKKTED
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