Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1781 |
Symbol | |
ID | 4921110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2037965 |
End bp | 2038945 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640163342 |
Product | hypothetical protein |
Protein accession | YP_001093906 |
Protein GI | 127512709 |
COG category | [R] General function prediction only |
COG ID | [COG1054] Predicted sulfurtransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTCAGT TTGTAGTATG TGCGTTATAT AAGTTTGTCT CCCTGCCGGC CTTCGAAGCC CTGCAGCAGC CGTTGCTGAA GGAGATGGAA TCTTTAGAGA TCAAGGGCAC TTTGCTGCTG GCCAGCGAAG GGATCAACGG TACGGTCGCC GGCAGTCAGG CGGGGATCGA TAGTCTGCTG GCCTGGTTAG ACGCCCAGCC AGGGCTGGAT AATATCGTCT ACAAGCTGTC TTTTGACGAT GAGATGCCAT TCTATCGTAC TAAGGTCAAG CTGAAGAAAG AGATAGTCAC CATGGGGGTC GAAGGCATAG ATCCCCGTAA GGTGGTGGGC ACCTATGTGA AGCCTAAGGA CTGGAACAAG CTGATCTCAG ATCCCGAGGT GCTGCTGATT GACACCCGTA ACGACTATGA GGTCAACATA GGCACCTTCA AGAATGCGGT CGACCCTAAG ACCCAGACCT TCAGAGAGTT TCCCGACTAT GTGAAGCAGA ATCTGGATCC TAAGCAACAC AAGAAGGTTG CCATGTTCTG CACCGGCGGC ATTCGCTGCG AGAAATCCAC CGCCTACCTC AAAGAGCAGG GGTTCGATGA GGTGTATCAC TTAGAAGGCG GCGTGCTTAA GTATCTGGAA GAGGTTAAGC CCGAGGAGAG TCTCTGGGAA GGCGAGTGTT TCGTGTTCGA CAATCGCGTG TCGGTCAACC ATCAGCTGGA AAAGGGACAG TACGACCAGT GTAATGCCTG TCGTCTGCCT ATTACCGAAG AAGACAAACA AAGCGAGCAT TATGTGCAGG GCGTAAGCTG CCCACACTGC ATAGACAAGT TGTCTGACAA GCAGCGCAAG CGTTTCGTCG AGCGTGAGCG TCAGGTGCAA CTGGCCAAGT CACGCGGCGA GAGCCATATC GGCAGCGATG TGAAGCAAGT GATTGAGGCG CGCCGTCAGG ACAAGGTCGA GCGCAAACAG CGCCAGCATC AGGAAGGTTA A
|
Protein sequence | MSQFVVCALY KFVSLPAFEA LQQPLLKEME SLEIKGTLLL ASEGINGTVA GSQAGIDSLL AWLDAQPGLD NIVYKLSFDD EMPFYRTKVK LKKEIVTMGV EGIDPRKVVG TYVKPKDWNK LISDPEVLLI DTRNDYEVNI GTFKNAVDPK TQTFREFPDY VKQNLDPKQH KKVAMFCTGG IRCEKSTAYL KEQGFDEVYH LEGGVLKYLE EVKPEESLWE GECFVFDNRV SVNHQLEKGQ YDQCNACRLP ITEEDKQSEH YVQGVSCPHC IDKLSDKQRK RFVERERQVQ LAKSRGESHI GSDVKQVIEA RRQDKVERKQ RQHQEG
|
| |