| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1758 |
|---|
| Symbol | |
|---|
| ID | 4923187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 2009066 |
|---|
| End bp | 2009314 |
|---|
| Gene Length | 249 bp |
|---|
| Protein Length | 82 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640163319 |
|---|
| Product | hydrogenase assembly chaperone hypC/hupF |
|---|
| Protein accession | YP_001093883 |
|---|
| Protein GI | 127512686 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0298] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00074] hydrogenase assembly chaperone HypC/HupF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCCTAT CCATCCCCTC AAGAATTGTA GCACTCCACC CCGAGGAGCA GGCCGTGACG
GTCGAGACCC TGGGGGTGAA GCGCAAGGTC AGCAGCCATC TGATGGAGGA GCCACTGGCG
CTTGACGACT ATGTGCTGAT CCATATCGGC TTCGTGATGA ACAAGATAGA CAAGGCCGAC
GCCGAGCAGA GCCTGGCCCT GTATCAGGAG ATCGTCGCCA AGATGAATGA GCAGGAGACC
CAGGCATGA
|
|---|
| Protein sequence | MCLSIPSRIV ALHPEEQAVT VETLGVKRKV SSHLMEEPLA LDDYVLIHIG FVMNKIDKAD
AEQSLALYQE IVAKMNEQET QA
|
|---|
| |