Gene Shew_1745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1745 
Symbol 
ID4924044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1994318 
End bp1994770 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content54% 
IMG OID640163307 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001093871 
Protein GI127512674 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGAG AATTACGCAG GGCAAGCTTG GAAGATGCGG CCGTTGTCGC GGGCCTGTTT 
AACGAATATC GTCAGTTCTA TGGTCAGGCG AGCGATATTG ACCTGGCCAA CAAGTTTATC
AATGCCCGCC TGGCGCGCAA GGATGCGGTG ATCTTCTTGA TGTTAGATGC CCAGGGCAAT
GGCCTGGGCT TTTGCCAGCT CTATCCTAGT TTCAGCTCTA TCCATGCCCG CGCCAACCTT
ATCCTGAGCG ACCTCTATGT CACCCAGCAT GCCCGCTGCG TCGGGGTAGG GCGGCGATTG
ATGACGACCG CCATCGATTA TGCCAAGGCC AAGGGGATTG CCTCGATCTT TCTCGAAACC
CATAAAGATA ACCATCAGGC CCAGGCCCTG TATGAGTCGC TCGGCTTCCA GCTGGAGCAA
GAATTTTTAG GCTATAACCT TGATATTCAG TGA
 
Protein sequence
MSGELRRASL EDAAVVAGLF NEYRQFYGQA SDIDLANKFI NARLARKDAV IFLMLDAQGN 
GLGFCQLYPS FSSIHARANL ILSDLYVTQH ARCVGVGRRL MTTAIDYAKA KGIASIFLET
HKDNHQAQAL YESLGFQLEQ EFLGYNLDIQ